RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TMEM97Q5BJF2 176 aa4.02□□□□□ -1.77
PHF3-210ENST00000509876 EML6Q6ZMW3 1958 aa4.02□□□□□ -1.77
PHF3-210ENST00000509876 SEPSECSQ9HD40 501 aaKnown RBP4.02□□□□□ -1.77
PHF3-210ENST00000509876 ZNF256Q9Y2P7 627 aaPredicted RBP4.02□□□□□ -1.77
PHF3-210ENST00000509876 ARL2-SNX15V9GYD0 113 aa4.02□□□□□ -1.77
PHF3-210ENST00000509876 IGF1P05019 195 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 DEFB130BP0DP73 79 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 DEFB130AP0DP74 79 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 REC114Q7Z4M0 266 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 ARHGAP21Q5T5U3 1957 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 C7orf71A4D174 169 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 ZNF253O75346 499 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 BTF3P20290 206 aaKnown RBP4.01□□□□□ -1.77
PHF3-210ENST00000509876 OR10J3Q5JRS4 329 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 MBD3L1Q8WWY6 194 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 ALKBH7Q9BT30 221 aaPredicted RBP4.01□□□□□ -1.77
PHF3-210ENST00000509876 MS4A6AQ9H2W1 248 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 ABCA4P78363 2273 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 TRBV9A0A0B4J1U6 114 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 IGKV3OR2-268A0A0C4DH90 116 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 CDKN1BP46527 198 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 PKIAP61925 76 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 SRSF4Q08170 494 aaKnown RBP4.01□□□□□ -1.77
PHF3-210ENST00000509876 DYSFO75923 2080 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 A0A1B0GUT8 65 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 C2orf70A6NJV1 201 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 F5H768 121 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 LYL1P12980 280 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 RIPPLY3P57055 190 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 FAM3BP58499 235 aaPredicted RBP4.01□□□□□ -1.77
PHF3-210ENST00000509876 IGFL4Q6B9Z1 124 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 TMEM256Q8N2U0 113 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 C2CD4CQ8TF44 421 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 C2orf88Q9BSF0 95 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 MAP1LC3CQ9BXW4 147 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 CPAMD8Q8IZJ3 1885 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 PSCAO43653 123 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 FAM90A2PQ658T7 463 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 RNF182Q8N6D2 247 aa4.01□□□□□ -1.77
PHF3-210ENST00000509876 C7orf77A4D0Y5 90 aa4□□□□□ -1.77
PHF3-210ENST00000509876 LY6LH3BQJ8 138 aa4□□□□□ -1.77
PHF3-210ENST00000509876 I3L2K1 104 aa4□□□□□ -1.77
PHF3-210ENST00000509876 EREGO14944 169 aa4□□□□□ -1.77
PHF3-210ENST00000509876 KRTDAPP60985 99 aa4□□□□□ -1.77
PHF3-210ENST00000509876 DYNAPQ8N1N2 210 aa4□□□□□ -1.77
PHF3-210ENST00000509876 TMEM75Q8N9X5 138 aa4□□□□□ -1.77
PHF3-210ENST00000509876 WIPF2Q8TF74 440 aaPredicted RBP4□□□□□ -1.77
PHF3-210ENST00000509876 VSIRQ9H7M9 311 aa4□□□□□ -1.77
PHF3-210ENST00000509876 ST20Q9HBF5 79 aa4□□□□□ -1.77
PHF3-210ENST00000509876 RPL36AP83881 106 aaKnown RBP4□□□□□ -1.77
PHF3-210ENST00000509876 CD300CQ08708 224 aa4□□□□□ -1.77
PHF3-210ENST00000509876 TMEM88Q6PEY1 159 aa4□□□□□ -1.77
PHF3-210ENST00000509876 C11orf42Q8N5U0 333 aa4□□□□□ -1.77
PHF3-210ENST00000509876 RPL36ALQ969Q0 106 aaKnown RBP4□□□□□ -1.77
PHF3-210ENST00000509876 ZNF702PQ9H963 129 aa4□□□□□ -1.77
PHF3-210ENST00000509876 A0A1W2PPR1 153 aa4□□□□□ -1.77
PHF3-210ENST00000509876 LINC00862A6NCI5 91 aa4□□□□□ -1.77
PHF3-210ENST00000509876 TEX22C9J3V5 150 aa4□□□□□ -1.77
PHF3-210ENST00000509876 PRSS2P07478 247 aa4□□□□□ -1.77
PHF3-210ENST00000509876 CGB3P0DN86 165 aa4□□□□□ -1.77
PHF3-210ENST00000509876 CGB7P0DN87 165 aa4□□□□□ -1.77
PHF3-210ENST00000509876 EBI3Q14213 229 aa4□□□□□ -1.77
PHF3-210ENST00000509876 SPINK13Q1W4C9 94 aa4□□□□□ -1.77
PHF3-210ENST00000509876 FAM24BQ8N5W8 94 aa4□□□□□ -1.77
PHF3-210ENST00000509876 KLK5Q9Y337 293 aaPredicted RBP4□□□□□ -1.77
PHF3-210ENST00000509876 TRBV19A0A075B6N1 114 aa4□□□□□ -1.77
PHF3-210ENST00000509876 H3BVH4 76 aa4□□□□□ -1.77
PHF3-210ENST00000509876 ERCC8Q13216 396 aa4□□□□□ -1.77
PHF3-210ENST00000509876 SLC25A2Q9BXI2 301 aa4□□□□□ -1.77
PHF3-210ENST00000509876 OR8A1Q8NGG7 326 aa4□□□□□ -1.77
PHF3-210ENST00000509876 MRPL53Q96EL3 112 aaKnown RBP4□□□□□ -1.77
PHF3-210ENST00000509876 ICE1Q9Y2F5 2266 aa4□□□□□ -1.77
PHF3-210ENST00000509876 INS-IGF2F8WCM5 200 aa4□□□□□ -1.77
PHF3-210ENST00000509876 RNF152Q8N8N0 203 aa4□□□□□ -1.77
PHF3-210ENST00000509876 LINC01006Q8NI28 216 aa4□□□□□ -1.77
PHF3-210ENST00000509876 IGHV1OR15-1A0A075B7D0 117 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 TRAV9-2A0A087WT02 112 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 SH2D1AO60880 128 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 IGHV3-53P01767 116 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 NMBP08949 121 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 PPIFP30405 207 aaKnown RBP3.99□□□□□ -1.77
PHF3-210ENST00000509876 MED12LQ86YW9 2145 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 IL36BQ9NZH7 164 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 K7EIM0 57 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 MALP21145 153 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 PMS2P11Q13670 270 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 CD300EQ496F6 205 aaPredicted RBP3.99□□□□□ -1.77
PHF3-210ENST00000509876 PIFOQ8TCI5 191 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 CHCHD5Q9BSY4 110 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 KLK15Q9H2R5 256 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 GEMIN7Q9H840 131 aaKnown RBP3.99□□□□□ -1.77
PHF3-210ENST00000509876 DIRC3C9JPN6 131 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 FABP4P15090 132 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 COTL1Q14019 142 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 PDZD11Q5EBL8 140 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 Q8TAT8 98 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 CSTL1Q9H114 145 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 A0A087WX48 190 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 IZUMO1RA6ND01 250 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms