RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PLXNA3P51805 1871 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 H3BMG7 143 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 LYRM1O43325 122 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 MORN2Q502X0 79 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 FAM216BQ8N7L0 139 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 SPACA4Q8TDM5 124 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 POP5Q969H6 163 aaKnown RBP1.85□□□□□ -2.11
DHFR-204ENST00000508282 PRELID3AQ96N28 172 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 AP1S3Q96PC3 154 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 TSC22D3Q99576 134 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 CBLN4Q9NTU7 201 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 DISP1Q96F81 1524 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 NISCHQ9Y2I1 1504 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 MED23Q9ULK4 1368 aa1.85□□□□□ -2.11
DHFR-204ENST00000508282 MICAL3Q7RTP6 2002 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 TCOF1Q13428 1488 aaKnown RBP1.84□□□□□ -2.11
DHFR-204ENST00000508282 TRBV27A0A0K0K1C4 114 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 PAEPP09466 180 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 COX4I1P13073 169 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 RAB5CP51148 216 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 LINC00311Q8N616 119 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 TMEM254Q8TBM7 123 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 BRK1Q8WUW1 75 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 PFDN5Q99471 154 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 ARHGEF11O15085 1522 aa1.84□□□□□ -2.11
DHFR-204ENST00000508282 RP1P56715 2156 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 MYLKQ15746 1914 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 ADGRB3O60242 1522 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 COL11A1P12107 1806 aaPredicted RBP1.83□□□□□ -2.12
DHFR-204ENST00000508282 A0A1B0GW64 132 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 OR2T8A6NH00 312 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 C5orf58C9J3I9 102 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 M0R233 179 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 CRPP02741 224 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 RPL22P35268 128 aaKnown RBP1.83□□□□□ -2.12
DHFR-204ENST00000508282 Q1T7F1 81 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 KRTAP13-4Q3LI77 160 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 OR8J3Q8NGG0 315 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 OR5A2Q8NGI9 324 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 OR5D14Q8NGL3 314 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 CALML5Q9NZT1 146 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 FRMPD1Q5SYB0 1578 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 KIAA1107Q9UPP5 1409 aa1.83□□□□□ -2.12
DHFR-204ENST00000508282 MDC1Q14676 2089 aaKnown RBP1.82□□□□□ -2.12
DHFR-204ENST00000508282 STRCP1A6NGW2 1772 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 DLC1Q96QB1 1528 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 BRWD1Q9NSI6 2320 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 ZFC3H1O60293 1989 aaKnown RBP1.82□□□□□ -2.12
DHFR-204ENST00000508282 TRAV14DV4A0A0A6YYC5 116 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 TRAV12-1A0A0B4J245 112 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 F8W036 122 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 CRYGSP22914 178 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 ROMO1P60602 79 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 MRPS36P82909 103 aaKnown RBP1.82□□□□□ -2.12
DHFR-204ENST00000508282 CDK5R1Q15078 307 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 RPS19BP1Q86WX3 136 aaKnown RBP1.82□□□□□ -2.12
DHFR-204ENST00000508282 SFT2D1Q8WV19 159 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 DIRC1Q969H9 104 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 MAGOHBQ96A72 148 aaKnown RBP1.82□□□□□ -2.12
DHFR-204ENST00000508282 HYLS1Q96M11 299 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 TAF9BQ9HBM6 251 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 OR5AC2Q9NZP5 309 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 PAIP2BQ9ULR5 123 aaKnown RBP1.82□□□□□ -2.12
DHFR-204ENST00000508282 FANCMQ8IYD8 2048 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 DSPPQ9NZW4 1301 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 RTTNQ86VV8 2226 aa1.82□□□□□ -2.12
DHFR-204ENST00000508282 DIDO1Q9BTC0 2240 aaKnown RBP1.81□□□□□ -2.12
DHFR-204ENST00000508282 POLEQ07864 2286 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 ICE1Q9Y2F5 2266 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 IGKV2D-26A0A0A0MRZ7 120 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 hDV103S1A0JD37 113 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 C2orf70A6NJV1 201 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 MT-ND4LP03901 98 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 MPC1LP0DKB6 136 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 TPT1P13693 172 aaKnown RBP1.81□□□□□ -2.12
DHFR-204ENST00000508282 FABP4P15090 132 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 BRS3P32247 399 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 MAXP61244 160 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 CDK6Q00534 326 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 DEFB113Q30KQ7 82 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 Q5XG85 94 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 LRRC18Q8N456 261 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 Q8N814 137 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 MORN4Q8NDC4 146 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 RNASE11Q8TAA1 199 aaKnown RBP1.81□□□□□ -2.12
DHFR-204ENST00000508282 NAT14Q8WUY8 206 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 MUCL1Q96DR8 90 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 TPRKBQ9Y3C4 175 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 SOGA1O94964 1423 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 HEATR5BQ9P2D3 2071 aa1.81□□□□□ -2.12
DHFR-204ENST00000508282 PCDH15Q96QU1 1955 aa1.8□□□□□ -2.12
DHFR-204ENST00000508282 IGLV1-51P01701 117 aa1.8□□□□□ -2.12
DHFR-204ENST00000508282 EVI2AP22794 236 aa1.8□□□□□ -2.12
DHFR-204ENST00000508282 DSCR4P56555 118 aaPredicted RBP1.8□□□□□ -2.12
DHFR-204ENST00000508282 LSM3P62310 102 aaKnown RBP1.8□□□□□ -2.12
DHFR-204ENST00000508282 HIST1H1AQ02539 215 aaPredicted RBP1.8□□□□□ -2.12
DHFR-204ENST00000508282 HSD17B12Q53GQ0 312 aa1.8□□□□□ -2.12
DHFR-204ENST00000508282 C1orf134Q5TEV5 83 aa1.8□□□□□ -2.12
DHFR-204ENST00000508282 TMEM244Q5VVB8 128 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms