RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 ATP5G2Q06055 141 aa11.99□□□□□ -0.49
SNCAIP-207ENST00000504884 C19orf54Q5BKX5 351 aa11.99□□□□□ -0.49
SNCAIP-207ENST00000504884 CLEC19AQ6UXS0 136 aa11.99□□□□□ -0.49
SNCAIP-207ENST00000504884 OR4B1Q8NGF8 309 aa11.99□□□□□ -0.49
SNCAIP-207ENST00000504884 ABCA2Q9BZC7 2435 aa11.99□□□□□ -0.49
SNCAIP-207ENST00000504884 COL12A1Q99715 3063 aa11.99□□□□□ -0.49
SNCAIP-207ENST00000504884 NUPR1O60356 82 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 ZNF253O75346 499 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 COL8A1P27658 744 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 PAFAH1B2P68402 229 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 BAGE3Q86Y29 109 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 OR5R1Q8NH85 324 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 NRGNQ92686 78 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 CCDC140Q96MF4 163 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 ZFAND3Q9H8U3 227 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 TP53TG3Q9ULZ0 132 aa11.98□□□□□ -0.49
SNCAIP-207ENST00000504884 IGHV3-35A0A0C4DH35 117 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 A0A1B0GUS0 222 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 A6NDX4 124 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 FAM223BA6NKX1 122 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 M0QZK8 103 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 M0R3E3 92 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 OR10J3Q5JRS4 329 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 FAM223AQ8IWN6 122 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 GNB4Q9HAV0 340 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 SOX21Q9Y651 276 aaPredicted RBP11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 IGF1P05019 195 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 GZMBP10144 247 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 RELQ04864 619 aaPredicted RBP11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 CDPF1Q6NVV7 123 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
SNCAIP-207ENST00000504884 USP9XQ93008 2570 aaPredicted RBP11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 FBLL1A6NHQ2 334 aaKnown RBP11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 H3BUX3 64 aa11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 BUB3O43684 328 aa11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 KIAA1644Q3SXP7 199 aa11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 C9orf152Q5JTZ5 239 aa11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 C16orf54Q6UWD8 224 aa11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 CSMD1Q96PZ7 3565 aa11.96□□□□□ -0.49
SNCAIP-207ENST00000504884 SVEP1Q4LDE5 3571 aa11.96□□□□□ -0.5
SNCAIP-207ENST00000504884 A0A1B0GXF2 115 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 BRI3O95415 125 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 IGHG2P01859 326 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 TPPP2P59282 170 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 SRSF1Q07955 248 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 LY6EQ16553 131 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 RBPMS2Q6ZRY4 209 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 LINC01356Q8N9X3 169 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 FLNCQ14315 2725 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 IGHV3OR16-8A0A075B7F1 116 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 SERF1AO75920 110 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 FOXA3P55318 350 aaPredicted RBP11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 C1orf194Q5T5A4 169 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 OR2D3Q8NGH3 330 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 ZC2HC1AQ96GY0 325 aa11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 NOL4LQ96MY1 436 aaPredicted RBP11.95□□□□□ -0.5
SNCAIP-207ENST00000504884 A0A087X0K7 114 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 ZNF785A8K8V0 405 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 H3BUA1 57 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 AVPP01185 164 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 TRGV3P03979 118 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 SRIP30626 198 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 LINC00310P59036 64 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 HBBP68871 147 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 SLAQ13239 276 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 GDF5OSQ5U4N7 250 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 LINC00527Q9UJ94 153 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 SPG11Q96JI7 2443 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 USP24Q9UPU5 2620 aa11.94□□□□□ -0.5
SNCAIP-207ENST00000504884 CLPSL1A2RUU4 121 aa11.93□□□□□ -0.5
SNCAIP-207ENST00000504884 CAMPP49913 170 aa11.93□□□□□ -0.5
SNCAIP-207ENST00000504884 SAPCD1Q5SSQ6 148 aa11.93□□□□□ -0.5
SNCAIP-207ENST00000504884 PGLYRP4Q96LB8 373 aa11.93□□□□□ -0.5
SNCAIP-207ENST00000504884 METTL26Q96S19 204 aa11.93□□□□□ -0.5
SNCAIP-207ENST00000504884 A8MWP6 167 aa11.93□□□□□ -0.5
SNCAIP-207ENST00000504884 CHEK1O14757 476 aa11.93□□□□□ -0.5
SNCAIP-207ENST00000504884 CT45A10P0DMU9 189 aa11.93□□□□□ -0.5
SNCAIP-207ENST00000504884 LINC00587B1AMM8 73 aa11.92□□□□□ -0.5
SNCAIP-207ENST00000504884 PPIFP30405 207 aaKnown RBP11.92□□□□□ -0.5
SNCAIP-207ENST00000504884 CRIP1P50238 77 aa11.92□□□□□ -0.5
SNCAIP-207ENST00000504884 COX8CQ7Z4L0 72 aa11.92□□□□□ -0.5
SNCAIP-207ENST00000504884 USMG5Q96IX5 58 aa11.92□□□□□ -0.5
SNCAIP-207ENST00000504884 VPS13CQ709C8 3753 aa11.92□□□□□ -0.5
SNCAIP-207ENST00000504884 A1L4Q6 167 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 F2Z2F3 143 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 J3QLI3 93 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 LCN12Q6JVE5 192 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 A0A096LNT2 108 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 IGHG4P01861 327 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 Q71RC1 249 aaPredicted RBP11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 SLC50A1Q9BRV3 221 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 U3KQE9 123 aa11.91□□□□□ -0.5
SNCAIP-207ENST00000504884 IGKV2-40A0A087WW87 121 aaPredicted RBP11.9□□□□□ -0.5
SNCAIP-207ENST00000504884 HAX1O00165 279 aa11.9□□□□□ -0.5
SNCAIP-207ENST00000504884 IGKV2D-40P01614 121 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms