RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 KRTDAPP60985 99 aa8.67□□□□□ -1.02
CMSS1-208ENST00000496116 FAM162BQ5T6X4 162 aa8.67□□□□□ -1.02
CMSS1-208ENST00000496116 FAM110DQ8TAY7 271 aaPredicted RBP8.67□□□□□ -1.02
CMSS1-208ENST00000496116 BORCS7Q96B45 105 aa8.67□□□□□ -1.02
CMSS1-208ENST00000496116 RABAC1Q9UI14 185 aa8.67□□□□□ -1.02
CMSS1-208ENST00000496116 OVOL3O00110 214 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 HSBP1O75506 76 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 CTSGP08311 255 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 CT45A10P0DMU9 189 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
CMSS1-208ENST00000496116 FAM120AOSQ5T036 256 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 UNQ5815/PRO19632Q6UWF5 114 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 ZC2HC1AQ96GY0 325 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 VAMP8Q9BV40 100 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 CHEK1O14757 476 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 NTF3P20783 257 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 ECSCRQ19T08 205 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 C16orf54Q6UWD8 224 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 ARL6IP6Q8N6S5 226 aa8.66□□□□□ -1.02
CMSS1-208ENST00000496116 M0R3E3 92 aa8.65□□□□□ -1.02
CMSS1-208ENST00000496116 NPFFO15130 113 aa8.65□□□□□ -1.02
CMSS1-208ENST00000496116 BCL6BQ8N143 479 aaPredicted RBP8.65□□□□□ -1.02
CMSS1-208ENST00000496116 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.02
CMSS1-208ENST00000496116 AJUBAQ96IF1 538 aa8.65□□□□□ -1.02
CMSS1-208ENST00000496116 C2orf88Q9BSF0 95 aa8.65□□□□□ -1.02
CMSS1-208ENST00000496116 NCOR2Q9Y618 2525 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 FBLL1A6NHQ2 334 aaKnown RBP8.65□□□□□ -1.03
CMSS1-208ENST00000496116 ATP6V0E1O15342 81 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 RAB9AP51151 201 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 KLK9Q2XQG4 91 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 C15orf32Q32M92 178 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 Q6AWC8 147 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 FAM19A2Q8N3H0 131 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 KLK9Q9UKQ9 250 aa8.65□□□□□ -1.03
CMSS1-208ENST00000496116 CHD8Q9HCK8 2581 aa8.64□□□□□ -1.03
CMSS1-208ENST00000496116 CENPVL3A0A0U1RRI6 287 aa8.64□□□□□ -1.03
CMSS1-208ENST00000496116 RNASEKQ6P5S7 137 aaKnown RBP8.64□□□□□ -1.03
CMSS1-208ENST00000496116 NIT1Q86X76 327 aa8.64□□□□□ -1.03
CMSS1-208ENST00000496116 ZNF502Q8TBZ5 544 aa8.64□□□□□ -1.03
CMSS1-208ENST00000496116 A0A1B0GUT8 65 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 A0A1B0GW15 77 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 M0R2Z0 102 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 GOSR1O95249 250 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 IGHV4-39P01824 125 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 GPR183P32249 361 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 RHOGP84095 191 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 RIGQ13278 110 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 PIMREGQ9BSJ6 248 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 PAM16Q9Y3D7 125 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.63□□□□□ -1.03
CMSS1-208ENST00000496116 A0A1B0GV90 55 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
CMSS1-208ENST00000496116 C3orf79P0CE67 100 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 SAPCD1Q5SSQ6 148 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 NDFIP1Q9BT67 221 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 RNF114Q9Y508 228 aa8.63□□□□□ -1.03
CMSS1-208ENST00000496116 LOC102724200A0A096LPH7 203 aaPredicted RBP8.62□□□□□ -1.03
CMSS1-208ENST00000496116 APOHP02749 345 aaPredicted RBP8.62□□□□□ -1.03
CMSS1-208ENST00000496116 CLEC3BP05452 202 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 RAB4AP20338 218 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 TDRG1Q3Y452 100 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 CHCHD1Q96BP2 118 aaKnown RBP8.62□□□□□ -1.03
CMSS1-208ENST00000496116 MED13LQ71F56 2210 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 ZNF785A8K8V0 405 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 CRIP1P50238 77 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 PAX8Q06710 450 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 C5orf56Q8N8D9 126 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 Q8N976 141 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 EEF1AKMT3Q96AZ1 226 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 C8orf49Q96NF6 230 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 CCL19Q99731 98 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
CMSS1-208ENST00000496116 TRBV7-1A0A0A6YYK4 115 aa8.61□□□□□ -1.03
CMSS1-208ENST00000496116 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
CMSS1-208ENST00000496116 M0R143 59 aa8.61□□□□□ -1.03
CMSS1-208ENST00000496116 RELQ04864 619 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-208ENST00000496116 DMRTA1Q5VZB9 504 aa8.61□□□□□ -1.03
CMSS1-208ENST00000496116 CYB5R2Q6BCY4 276 aa8.61□□□□□ -1.03
CMSS1-208ENST00000496116 ZNF705AQ6ZN79 300 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-208ENST00000496116 Q71RC1 249 aaPredicted RBP8.61□□□□□ -1.03
CMSS1-208ENST00000496116 COX8CQ7Z4L0 72 aa8.61□□□□□ -1.03
CMSS1-208ENST00000496116 ASCL2Q99929 193 aa8.61□□□□□ -1.03
CMSS1-208ENST00000496116 MOB4Q9Y3A3 225 aa8.61□□□□□ -1.03
CMSS1-208ENST00000496116 IGHV3-35A0A0C4DH35 117 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 TMEM189A5PLL7 270 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 NDUFS8O00217 210 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 ARMS2P0C7Q2 107 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 BTF3P20290 206 aaKnown RBP8.6□□□□□ -1.03
CMSS1-208ENST00000496116 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 MRPL52Q86TS9 123 aaKnown RBP8.6□□□□□ -1.03
CMSS1-208ENST00000496116 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 SMAD5-AS1Q9Y6J3 95 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 IGKV2-40A0A087WW87 121 aaPredicted RBP8.6□□□□□ -1.03
CMSS1-208ENST00000496116 G3V318 75 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 BUB3O43684 328 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 IGKV2D-40P01614 121 aaPredicted RBP8.6□□□□□ -1.03
CMSS1-208ENST00000496116 CLEC19AQ6UXS0 136 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 GATD1Q8NB37 220 aa8.6□□□□□ -1.03
CMSS1-208ENST00000496116 PRR25Q96S07 402 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms