RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 LHFPL3Q86UP9 236 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 UBAC2Q8NBM4 344 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 Q9H3A6 140 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 GHRLQ9UBU3 117 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 LINC00588Q9Y4M8 146 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 PUS1Q9Y606 427 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 RFNGQ9Y644 331 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 TRAV14DV4A0A0A6YYC5 116 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 TRAV1-2A0A0B4J238 106 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 SMIM9A6NGZ8 99 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 C1orf196B1AJZ1 125 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 J3QRE1 110 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 ARPC5O15511 151 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 RAB4BP61018 213 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 CLINT1Q14677 625 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 SMCO1Q147U7 214 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 BEST4Q8NFU0 473 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZNF414Q96IQ9 312 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 HRASLSQ9HDD0 168 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 NIT2Q9NQR4 276 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 XCL2Q9UBD3 114 aa6.69□□□□□ -1.34
SMARCAL1-213ENST00000496037 FXYD6-FXYD2A0A087WZ82 144 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 TRBV6-6A0A0A6YYG2 114 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 KANTRA0A1W2PQU2 76 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 GABARAPH6UMI1 98 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 NDUFB6O95139 128 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 SIX6O95475 246 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 OXTP01178 125 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 IGFBP3P17936 291 aaPredicted RBP6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 GNRHRP30968 328 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 FAUP35544 74 aaKnown RBP6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 DAD1P61803 113 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 OR2F1Q13607 317 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZNF345Q14585 488 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 Q56UQ5 140 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 UBE2NLQ5JXB2 153 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 SSX7Q7RTT5 188 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 VKORC1L1Q8N0U8 176 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 PUSL1Q8N0Z8 303 aaKnown RBP6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZFP41Q8N8Y5 198 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 TMEM167AQ8TBQ9 72 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 TCTEX1D2Q8WW35 142 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 FXYD6Q9H0Q3 95 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 PLEKHJ1Q9NW61 149 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 C21orf62Q9NYP8 219 aa6.68□□□□□ -1.34
SMARCAL1-213ENST00000496037 IGHV3OR16-12A0A075B7B8 117 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 A0A0A6YYH2 397 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 IGKV1-6A0A0C4DH72 117 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 A6NJ64 397 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZNF688P0C7X2 276 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 LINC00315P59091 139 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 OR2B8PP59922 312 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 RPL8P62917 257 aaKnown RBP6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 PEA15Q15121 130 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 OR2B11Q5JQS5 317 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 DNLZQ5SXM8 178 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 LPCAT3Q6P1A2 487 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 DHRS11Q6UWP2 260 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 LRRTM1Q86UE6 522 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 KCNRGQ8N5I3 272 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 C15orf54Q8N8G6 183 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 RNASE11Q8TAA1 199 aaKnown RBP6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 OR10C1Q96KK4 312 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 GINS4Q9BRT9 223 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 GINS3Q9BRX5 216 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 HDHD3Q9BSH5 251 aaPredicted RBP6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 URM1Q9BTM9 101 aaKnown RBP6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 SEC11CQ9BY50 192 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 FNDC4Q9H6D8 234 aaPredicted RBP6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 AAMDCQ9H7C9 122 aa6.67□□□□□ -1.34
SMARCAL1-213ENST00000496037 TRAV8-7A0A075B6U6 113 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 ANKRD20A5PA0PJZ0 165 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZNF705FA8MVS1 300 aaPredicted RBP6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 GPR31O00270 319 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 BCL2L11O43521 198 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 ARL6IP5O75915 188 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZNF705DP0CH99 300 aaPredicted RBP6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZNF705BP0CI00 300 aaPredicted RBP6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 HLA-GP17693 338 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 BLOC1S1P78537 153 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 PHLDA2Q53GA4 152 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZNF705AQ6ZN79 300 aaPredicted RBP6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 LRTM2Q8N967 370 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 OR4A4PQ8NGN8 299 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 OR10J5Q8NHC4 309 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 RXFP4Q8TDU9 374 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 CMSS1Q9BQ75 279 aaKnown RBP6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 TMEM70Q9BUB7 260 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 TMEM59Q9BXS4 323 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 TMPRSS5Q9H3S3 457 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 SMCO4Q9NRQ5 59 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 ZNF586Q9NXT0 402 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 AK3Q9UIJ7 227 aa6.66□□□□□ -1.34
SMARCAL1-213ENST00000496037 IGHV3-21A0A0B4J1V1 117 aa6.65□□□□□ -1.34
SMARCAL1-213ENST00000496037 IGHV3-66A0A0C4DH42 116 aa6.65□□□□□ -1.34
SMARCAL1-213ENST00000496037 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
SMARCAL1-213ENST00000496037 TRDCB7Z8K6 153 aa6.65□□□□□ -1.34
SMARCAL1-213ENST00000496037 PRB4P10163 310 aaPredicted RBP6.65□□□□□ -1.34
SMARCAL1-213ENST00000496037 SLC25A4P12235 298 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms