RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 S100A7AQ86SG5 101 aa12.13□□□□□ -0.47
TMEM53-209ENST00000495630 CCDC28AQ8IWP9 274 aa12.13□□□□□ -0.47
TMEM53-209ENST00000495630 A0A0J9YY99 117 aa12.12□□□□□ -0.47
TMEM53-209ENST00000495630 DLK1P80370 383 aa12.12□□□□□ -0.47
TMEM53-209ENST00000495630 SPANXN5Q5MJ07 72 aa12.12□□□□□ -0.47
TMEM53-209ENST00000495630 CYP2G1PQ6ZSU1 146 aa12.12□□□□□ -0.47
TMEM53-209ENST00000495630 RPUSD4Q96CM3 377 aaKnown RBP12.12□□□□□ -0.47
TMEM53-209ENST00000495630 ZNF586Q9NXT0 402 aa12.12□□□□□ -0.47
TMEM53-209ENST00000495630 RSL24D1Q9UHA3 163 aaKnown RBP12.12□□□□□ -0.47
TMEM53-209ENST00000495630 INAFM2P0DMQ5 153 aa12.11□□□□□ -0.47
TMEM53-209ENST00000495630 HOXA5P20719 270 aa12.11□□□□□ -0.47
TMEM53-209ENST00000495630 RNF24Q9Y225 148 aa12.11□□□□□ -0.47
TMEM53-209ENST00000495630 STRAPQ9Y3F4 350 aaKnown RBP12.11□□□□□ -0.47
TMEM53-209ENST00000495630 OR5G3P0C626 314 aa12.1□□□□□ -0.47
TMEM53-209ENST00000495630 SELENOTP62341 195 aa12.1□□□□□ -0.47
TMEM53-209ENST00000495630 ACOT7LQ6ZUV0 252 aa12.1□□□□□ -0.47
TMEM53-209ENST00000495630 GAGE12BA1L429 117 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 GAGE7O76087 117 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 RLN2P04090 185 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 GAGE12FP0CL80 117 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 GAGE12GP0CL81 117 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 GAGE12IP0CL82 117 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 TMED4Q7Z7H5 227 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 LYPD1Q8N2G4 141 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 PTTG2Q9NZH5 202 aa12.09□□□□□ -0.47
TMEM53-209ENST00000495630 LINC00869P0C866 280 aa12.08□□□□□ -0.48
TMEM53-209ENST00000495630 CXCL2P19875 107 aa12.08□□□□□ -0.48
TMEM53-209ENST00000495630 ANXA7P20073 488 aaKnown RBP12.08□□□□□ -0.48
TMEM53-209ENST00000495630 LINC00315P59091 139 aa12.08□□□□□ -0.48
TMEM53-209ENST00000495630 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
TMEM53-209ENST00000495630 DMBT1Q9UGM3 2413 aaPredicted RBP12.07□□□□□ -0.48
TMEM53-209ENST00000495630 SMCO3A2RU48 225 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 SNURFLB1AK76 121 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 EREGO14944 169 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 MRPS12O15235 138 aaKnown RBP12.07□□□□□ -0.48
TMEM53-209ENST00000495630 VAMP1P23763 118 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 FAUP35544 74 aaKnown RBP12.07□□□□□ -0.48
TMEM53-209ENST00000495630 XGP55808 180 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 ID3Q02535 119 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 KIR3DS1Q14943 382 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 SPCS2Q15005 226 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 C4orf46Q504U0 113 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
TMEM53-209ENST00000495630 ZNF331Q9NQX6 463 aaPredicted RBP12.07□□□□□ -0.48
TMEM53-209ENST00000495630 PMS2P5A8MQ11 134 aa12.06□□□□□ -0.48
TMEM53-209ENST00000495630 H3BP45 60 aa12.06□□□□□ -0.48
TMEM53-209ENST00000495630 SFT2D2O95562 160 aa12.06□□□□□ -0.48
TMEM53-209ENST00000495630 DAZ2Q13117 558 aaKnown RBP12.06□□□□□ -0.48
TMEM53-209ENST00000495630 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
TMEM53-209ENST00000495630 LCN15Q6UWW0 184 aa12.06□□□□□ -0.48
TMEM53-209ENST00000495630 PATE2Q6UY27 113 aa12.06□□□□□ -0.48
TMEM53-209ENST00000495630 ARL6Q9H0F7 186 aa12.06□□□□□ -0.48
TMEM53-209ENST00000495630 NPVFQ9HCQ7 196 aa12.06□□□□□ -0.48
TMEM53-209ENST00000495630 K7EPK0 472 aa12.05□□□□□ -0.48
TMEM53-209ENST00000495630 HOXB5P09067 269 aa12.05□□□□□ -0.48
TMEM53-209ENST00000495630 SMIM18P0DKX4 95 aa12.05□□□□□ -0.48
TMEM53-209ENST00000495630 PRB4P10163 310 aaPredicted RBP12.05□□□□□ -0.48
TMEM53-209ENST00000495630 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
TMEM53-209ENST00000495630 GFI1BQ5VTD9 330 aa12.05□□□□□ -0.48
TMEM53-209ENST00000495630 CCDC190Q86UF4 302 aa12.05□□□□□ -0.48
TMEM53-209ENST00000495630 SLC25A21Q9BQT8 299 aaPredicted RBP12.05□□□□□ -0.48
TMEM53-209ENST00000495630 SLC50A1Q9BRV3 221 aa12.05□□□□□ -0.48
TMEM53-209ENST00000495630 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
TMEM53-209ENST00000495630 A0A096LPF7 62 aa12.04□□□□□ -0.48
TMEM53-209ENST00000495630 FABP12A6NFH5 140 aa12.04□□□□□ -0.48
TMEM53-209ENST00000495630 FNDC10F2Z333 226 aa12.04□□□□□ -0.48
TMEM53-209ENST00000495630 SIVA1O15304 175 aa12.04□□□□□ -0.48
TMEM53-209ENST00000495630 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
TMEM53-209ENST00000495630 PSENENQ9NZ42 101 aa12.04□□□□□ -0.48
TMEM53-209ENST00000495630 CCDC59Q9P031 241 aaKnown RBP12.04□□□□□ -0.48
TMEM53-209ENST00000495630 TNFSF8P32971 234 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 AP3S2P59780 193 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 ERVFC1-1P60608 527 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 POLR2GP62487 172 aaKnown RBP eCLIP12.03□□□□□ -0.48
TMEM53-209ENST00000495630 DYNC2LI1Q8TCX1 351 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 FRZBQ92765 325 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 SMIM8Q96KF7 97 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 C18orf15Q96N68 181 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 PYGO2Q9BRQ0 406 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 PARD6GQ9BYG4 376 aaPredicted RBP12.03□□□□□ -0.48
TMEM53-209ENST00000495630 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
TMEM53-209ENST00000495630 PRAC2D3DTV9 90 aa12.02□□□□□ -0.49
TMEM53-209ENST00000495630 PPP1R1AQ13522 171 aa12.02□□□□□ -0.49
TMEM53-209ENST00000495630 TEPPQ6URK8 271 aa12.02□□□□□ -0.49
TMEM53-209ENST00000495630 Q6ZTI0 123 aa12.02□□□□□ -0.49
TMEM53-209ENST00000495630 LINC00305Q7Z4B0 112 aa12.02□□□□□ -0.49
TMEM53-209ENST00000495630 BPIFA4PQ86YQ2 179 aa12.02□□□□□ -0.49
TMEM53-209ENST00000495630 TRAV12-3A0A0B4J271 114 aa12.01□□□□□ -0.49
TMEM53-209ENST00000495630 LEPP41159 167 aa12.01□□□□□ -0.49
TMEM53-209ENST00000495630 ZBTB8BQ8NAP8 495 aaPredicted RBP12.01□□□□□ -0.49
TMEM53-209ENST00000495630 ZNF431Q8TF32 576 aaPredicted RBP12.01□□□□□ -0.49
TMEM53-209ENST00000495630 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
TMEM53-209ENST00000495630 TRGV2A0A075B6R0 118 aa12□□□□□ -0.49
TMEM53-209ENST00000495630 GOSR2O14653 212 aa12□□□□□ -0.49
TMEM53-209ENST00000495630 IFNA5P01569 189 aa12□□□□□ -0.49
TMEM53-209ENST00000495630 CT45A10P0DMU9 189 aa12□□□□□ -0.49
TMEM53-209ENST00000495630 FUSP35637 526 aaKnown RBP eCLIP12□□□□□ -0.49
TMEM53-209ENST00000495630 RRAS2P62070 204 aaPredicted RBP12□□□□□ -0.49
TMEM53-209ENST00000495630 Q5VSD8 79 aa12□□□□□ -0.49
TMEM53-209ENST00000495630 NFE4Q86UQ8 179 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms