RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TRGV3P03979 118 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 S100A8P05109 93 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 CBLN1P23435 193 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 TCL1AP56279 114 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 TPPP2P59282 170 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 ATP5G2Q06055 141 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 GFI1BQ5VTD9 330 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 PRR27Q6MZM9 219 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 Q6ZS46 218 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 C9orf139Q6ZV77 190 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 Q96MF0 132 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 SMAD5-AS1Q9Y6J3 95 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 APCP25054 2843 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 POLQO75417 2590 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 CLEC3BP05452 202 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 SMIM6P0DI80 62 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 CDX1P47902 265 aaPredicted RBP8.22□□□□□ -1.09
CLCN6-208ENST00000494028 RELQ04864 619 aaPredicted RBP8.22□□□□□ -1.09
CLCN6-208ENST00000494028 TMEM95Q3KNT9 176 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 COA6Q5JTJ3 125 aaKnown RBP8.22□□□□□ -1.09
CLCN6-208ENST00000494028 LINC00322Q6ZN03 302 aaPredicted RBP8.22□□□□□ -1.09
CLCN6-208ENST00000494028 TMEM183AQ8IXX5 376 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 NUDT10Q8NFP7 164 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 NUDT11Q96G61 164 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 GRAMD2BQ96HH9 432 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 TACC2O95359 2948 aa8.22□□□□□ -1.09
CLCN6-208ENST00000494028 NBPF19A0A087WUL8 3843 aa8.21□□□□□ -1.09
CLCN6-208ENST00000494028 IZUMO1RA6ND01 250 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 DIRC3C9JPN6 131 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 NPIPB6E9PJ23 425 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 TRBV12-3P01733 135 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 FRMD6-AS1P0C7T7 363 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 S100A7P31151 101 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 ARL3P36405 182 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 MEOX2P50222 304 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 BLCAPP62952 87 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 PSG3Q16557 428 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 CT83Q5H943 113 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 C16orf54Q6UWD8 224 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 PRSS57Q6UWY2 283 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 GBGT1Q8N5D6 347 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
CLCN6-208ENST00000494028 AAMDCQ9H7C9 122 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 SERTAD4Q9NUC0 356 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 TRAPPC1Q9Y5R8 145 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 U3KQE9 123 aa8.21□□□□□ -1.1
CLCN6-208ENST00000494028 ITPR2Q14571 2701 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
CLCN6-208ENST00000494028 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 XKRY2A2RUG3 117 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 SNURFLB1AK76 121 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 BUB3O43684 328 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
CLCN6-208ENST00000494028 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 PRB4P10163 310 aaPredicted RBP8.2□□□□□ -1.1
CLCN6-208ENST00000494028 HLA-DMBP28068 263 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 IER3P46695 156 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 RAB9AP51151 201 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 PSG9Q00887 426 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 TMEM136Q6ZRR5 245 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 PRNTQ86SH4 94 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 CIARTQ8N365 385 aaPredicted RBP8.2□□□□□ -1.1
CLCN6-208ENST00000494028 OR5R1Q8NH85 324 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 ZC2HC1AQ96GY0 325 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 NEU1Q99519 415 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 C12orf57Q99622 126 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 MRPL18Q9H0U6 180 aaKnown RBP8.2□□□□□ -1.1
CLCN6-208ENST00000494028 ZNF331Q9NQX6 463 aaPredicted RBP8.2□□□□□ -1.1
CLCN6-208ENST00000494028 VPREB3Q9UKI3 123 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 PSG8Q9UQ74 426 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 PDZD2O15018 2839 aa8.2□□□□□ -1.1
CLCN6-208ENST00000494028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.19□□□□□ -1.1
CLCN6-208ENST00000494028 ZNF785A8K8V0 405 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 CHEK1O14757 476 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 IGHG4P01861 327 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 APOHP02749 345 aaPredicted RBP8.19□□□□□ -1.1
CLCN6-208ENST00000494028 MT-ND6P03923 174 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 PF4V1P10720 104 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 SLC35B1P78383 322 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 COX19Q49B96 90 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 PDZD11Q5EBL8 140 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 C1orf194Q5T5A4 169 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 MRPL54Q6P161 138 aaKnown RBP8.19□□□□□ -1.1
CLCN6-208ENST00000494028 WDR73Q6P4I2 378 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 ARL6IP6Q8N6S5 226 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 OR4B1Q8NGF8 309 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 TSKUQ8WUA8 353 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 USMG5Q96IX5 58 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 METTL26Q96S19 204 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 ASCL2Q99929 193 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 GPR61Q9BZJ8 451 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 PRSS22Q9GZN4 317 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 KLK15Q9H2R5 256 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
CLCN6-208ENST00000494028 CREBBPQ92793 2442 aa8.19□□□□□ -1.1
CLCN6-208ENST00000494028 IGHV3-66A0A0C4DH42 116 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 A0A1B0GXF2 115 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 K7EQM0 130 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 NDUFA4O00483 81 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms