RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 PPP1R3DO95685 299 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 HLA-DQA1P01909 254 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 SRP19P09132 144 aaKnown RBP3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 COX6A1P12074 109 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 CSN1S1P47710 185 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 RPL23P62829 140 aaKnown RBP3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 UBE2BP63146 152 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 INSL4Q14641 139 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 KIAA0087Q14695 138 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 MDP1Q86V88 176 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 C17orf82Q86X59 251 aaPredicted RBP3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 MORN4Q8NDC4 146 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 FAM57AQ8TBR7 257 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 KRTAP17-1Q9BYP8 105 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF831Q5JPB2 1677 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 FAM72CH0Y354 149 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF688P0C7X2 276 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 INAFM2P0DMQ5 153 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 EGR2P11161 476 aaPredicted RBP3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 CBLN1P23435 193 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 S100A4P26447 101 aaKnown RBP3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 AQP1P29972 269 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 FAUP35544 74 aaKnown RBP3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 SMIM11AP58511 58 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 TMEM155Q4W5P6 130 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 MPV17L2Q567V2 206 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 ARTNQ5T4W7 220 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 FAM72AQ5TYM5 149 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 FAM72DQ6L9T8 149 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 FAM72BQ86X60 149 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF584Q8IVC4 421 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF706Q9Y5V0 76 aaPredicted RBP3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 PIKFYVEQ9Y2I7 2098 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 LCTP09848 1927 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 SCN5AQ14524 2016 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 IGHV3-20A0A0C4DH32 117 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 MUC21A0A140T8X8 626 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 A8MWL6 223 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 IGHV4-39P01824 125 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 ETDBQ3ZM63 59 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 ORMDL2Q53FV1 153 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 Q6ZPA2 131 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 DEFB106AQ8N104 65 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 PPP1R1CQ8WVI7 109 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 TNFRSF19Q9NS68 423 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 SCN2AQ99250 2005 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 NLRC5Q86WI3 1866 aa3.41□□□□□ -1.86
SUPT20H-221ENST00000493537 UBR3Q6ZT12 1888 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 PLXNA1Q9UIW2 1896 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 KIF26AQ9ULI4 1882 aaPredicted RBP3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 IGHV1OR15-1A0A075B7D0 117 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 A0A0D9SEW6 157 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 TRBV7-7A0A0K0K1E9 115 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 IGKV1-5P01602 117 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 IGHV4-38-2P0DP08 117 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 IGHV1-2P23083 117 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 CXCL6P80162 114 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 MARCH3Q86UD3 253 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 C15orf53Q8NAA6 179 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 FAM213BQ8TBF2 198 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 DSCR8Q96T75 97 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 AMELYQ99218 206 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 C6orf106Q9H6K1 298 aaPredicted RBP3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF286AQ9HBT8 521 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF835Q9Y2P0 537 aa3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 KLK5Q9Y337 293 aaPredicted RBP3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.86
SUPT20H-221ENST00000493537 H3BUT2 72 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 ETV2O00321 342 aaPredicted RBP3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 PRSS1P07477 247 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 ZNF883P0CG24 379 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 DYNLT3P51808 116 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 ZNF136P52737 540 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 METTL27Q8N6F8 245 aaPredicted RBP3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 C3orf56Q8N813 242 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 C18orf32Q8TCD1 76 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 VSIG2Q96IQ7 327 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 NMES1Q9C002 83 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 EPDR1Q9UM22 224 aa3.4□□□□□ -1.87
SUPT20H-221ENST00000493537 DOCK4Q8N1I0 1966 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 TRAV9-2A0A087WT02 112 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 UMAD1C9J7I0 102 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 C17orf112F2Z3M2 114 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 SYS1-DBNDD2H3BUS1 97 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 HBDP02042 147 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 IGHV3-43DP0DP04 118 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 CYCSP99999 105 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 TWIST1Q15672 202 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 ZNF791Q3KP31 576 aaPredicted RBP3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 NOXRED1Q6NXP6 359 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 GPHB5Q86YW7 130 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 LINC01555Q8NAE3 123 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 CHAC1Q9BUX1 264 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 PARP12Q9H0J9 701 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 DPH3P1Q9H4G8 78 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 LTBP1Q14766 1721 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 PLXNB2O15031 1838 aa3.39□□□□□ -1.87
SUPT20H-221ENST00000493537 IGKV6D-21A0A0A0MT36 114 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms