RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 BTF3P20290 206 aaKnown RBP11.74□□□□□ -0.53
TOP3B-217ENST00000489581 M6PRP20645 277 aa11.74□□□□□ -0.53
TOP3B-217ENST00000489581 CDKN1BP46527 198 aa11.74□□□□□ -0.53
TOP3B-217ENST00000489581 KIR3DS1Q14943 382 aa11.74□□□□□ -0.53
TOP3B-217ENST00000489581 LRTM2Q8N967 370 aa11.74□□□□□ -0.53
TOP3B-217ENST00000489581 RPUSD4Q96CM3 377 aaKnown RBP11.74□□□□□ -0.53
TOP3B-217ENST00000489581 ZNF586Q9NXT0 402 aa11.74□□□□□ -0.53
TOP3B-217ENST00000489581 STRAPQ9Y3F4 350 aaKnown RBP11.74□□□□□ -0.53
TOP3B-217ENST00000489581 HERC1Q15751 4861 aa11.74□□□□□ -0.53
TOP3B-217ENST00000489581 A0A087X0K7 114 aa11.73□□□□□ -0.53
TOP3B-217ENST00000489581 H7BYZ3 331 aa11.73□□□□□ -0.53
TOP3B-217ENST00000489581 HOXB5P09067 269 aa11.73□□□□□ -0.53
TOP3B-217ENST00000489581 LINC00869P0C866 280 aa11.73□□□□□ -0.53
TOP3B-217ENST00000489581 HOXA5P20719 270 aa11.73□□□□□ -0.53
TOP3B-217ENST00000489581 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
TOP3B-217ENST00000489581 PARD6GQ9BYG4 376 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-217ENST00000489581 RSL24D1Q9UHA3 163 aaKnown RBP11.73□□□□□ -0.53
TOP3B-217ENST00000489581 DMBT1Q9UGM3 2413 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-217ENST00000489581 A0A1W2PPQ1 181 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 GAGE12BA1L429 117 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 GAGE7O76087 117 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 GAGE12FP0CL80 117 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 GAGE12GP0CL81 117 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 GAGE12IP0CL82 117 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 ZNF503Q96F45 646 aa11.72□□□□□ -0.53
TOP3B-217ENST00000489581 ADAP1O75689 374 aa11.71□□□□□ -0.53
TOP3B-217ENST00000489581 SNRPCP09234 159 aaKnown RBP11.71□□□□□ -0.53
TOP3B-217ENST00000489581 PLP1P60201 277 aa11.71□□□□□ -0.53
TOP3B-217ENST00000489581 DYNC2LI1Q8TCX1 351 aa11.71□□□□□ -0.53
TOP3B-217ENST00000489581 MRPS16Q9Y3D3 137 aaKnown RBP11.71□□□□□ -0.53
TOP3B-217ENST00000489581 PMS2P5A8MQ11 134 aa11.7□□□□□ -0.54
TOP3B-217ENST00000489581 SFT2D2O95562 160 aa11.7□□□□□ -0.54
TOP3B-217ENST00000489581 RLN2P04090 185 aa11.7□□□□□ -0.54
TOP3B-217ENST00000489581 ANXA7P20073 488 aaKnown RBP11.7□□□□□ -0.54
TOP3B-217ENST00000489581 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
TOP3B-217ENST00000489581 PATE2Q6UY27 113 aa11.7□□□□□ -0.54
TOP3B-217ENST00000489581 CCDC28AQ8IWP9 274 aa11.7□□□□□ -0.54
TOP3B-217ENST00000489581 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
TOP3B-217ENST00000489581 ARL6Q9H0F7 186 aa11.7□□□□□ -0.54
TOP3B-217ENST00000489581 CCDC59Q9P031 241 aaKnown RBP11.7□□□□□ -0.54
TOP3B-217ENST00000489581 FABP12A6NFH5 140 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 J3KRW8 73 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
TOP3B-217ENST00000489581 CCNKO75909 580 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 TNFSF8P32971 234 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOP3B-217ENST00000489581 LINC00315P59091 139 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 RRAS2P62070 204 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-217ENST00000489581 SELENOTP62341 195 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 POLR2GP62487 172 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOP3B-217ENST00000489581 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 GFI1BQ5VTD9 330 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 CCDC190Q86UF4 302 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 C20orf144Q9BQM9 153 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 ZNF331Q9NQX6 463 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-217ENST00000489581 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
TOP3B-217ENST00000489581 SNURFLB1AK76 121 aa11.68□□□□□ -0.54
TOP3B-217ENST00000489581 PRAC2D3DTV9 90 aa11.68□□□□□ -0.54
TOP3B-217ENST00000489581 S100A7AQ86SG5 101 aa11.68□□□□□ -0.54
TOP3B-217ENST00000489581 ARV1Q9H2C2 271 aa11.68□□□□□ -0.54
TOP3B-217ENST00000489581 H3BNG1 76 aa11.67□□□□□ -0.54
TOP3B-217ENST00000489581 H3BTX0 84 aa11.67□□□□□ -0.54
TOP3B-217ENST00000489581 INAFM2P0DMQ5 153 aa11.67□□□□□ -0.54
TOP3B-217ENST00000489581 ID3Q02535 119 aa11.67□□□□□ -0.54
TOP3B-217ENST00000489581 LCN15Q6UWW0 184 aa11.67□□□□□ -0.54
TOP3B-217ENST00000489581 TOMM5Q8N4H5 51 aa11.67□□□□□ -0.54
TOP3B-217ENST00000489581 TMPRSS5Q9H3S3 457 aa11.67□□□□□ -0.54
TOP3B-217ENST00000489581 FLG2Q5D862 2391 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-217ENST00000489581 A0A096LPF7 62 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 CXCL2P19875 107 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 SLC38A11Q08AI6 406 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 Q6ZRN7 208 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-217ENST00000489581 Q6ZTI0 123 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 MCFD2Q8NI22 146 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 TRIM63Q969Q1 353 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 SLC25A21Q9BQT8 299 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-217ENST00000489581 SLC50A1Q9BRV3 221 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 MRPS26Q9BYN8 205 aaKnown RBP11.66□□□□□ -0.54
TOP3B-217ENST00000489581 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 FAT1Q14517 4588 aa11.66□□□□□ -0.54
TOP3B-217ENST00000489581 TRAV12-3A0A0B4J271 114 aa11.65□□□□□ -0.54
TOP3B-217ENST00000489581 SLC17A3O00476 420 aa11.65□□□□□ -0.54
TOP3B-217ENST00000489581 SSSCA1O60232 199 aa11.65□□□□□ -0.54
TOP3B-217ENST00000489581 METTL15P1P0C7V9 234 aa11.65□□□□□ -0.54
TOP3B-217ENST00000489581 AP3S2P59780 193 aa11.65□□□□□ -0.54
TOP3B-217ENST00000489581 LINC00305Q7Z4B0 112 aa11.65□□□□□ -0.54
TOP3B-217ENST00000489581 VSIG2Q96IQ7 327 aa11.65□□□□□ -0.54
TOP3B-217ENST00000489581 SLIRPQ9GZT3 109 aaKnown RBP11.65□□□□□ -0.54
TOP3B-217ENST00000489581 PGPEP1Q9NXJ5 209 aa11.65□□□□□ -0.54
TOP3B-217ENST00000489581 LINC00854A0A1B0GVQ3 168 aa11.64□□□□□ -0.55
TOP3B-217ENST00000489581 XGP55808 180 aa11.64□□□□□ -0.55
TOP3B-217ENST00000489581 PYDC2Q56P42 97 aa11.64□□□□□ -0.55
TOP3B-217ENST00000489581 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
TOP3B-217ENST00000489581 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
TOP3B-217ENST00000489581 ZBTB8BQ8NAP8 495 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-217ENST00000489581 RAB2BQ8WUD1 216 aa11.64□□□□□ -0.55
TOP3B-217ENST00000489581 SMIM8Q96KF7 97 aa11.64□□□□□ -0.55
TOP3B-217ENST00000489581 RNF24Q9Y225 148 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms