RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 XCL2Q9UBD3 114 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 CELA1Q9UNI1 258 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 HLA-DRB4X5D2U9 266 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 M0R2Z0 102 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 M0R3E3 92 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 HMGB3O15347 200 aaKnown RBP4.7□□□□□ -1.66
PTPRD-212ENST00000488774 SPRY2O43597 315 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 COX7A2P2O60397 106 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 GIPP09681 153 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-212ENST00000488774 PVALBP20472 110 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-212ENST00000488774 PSMB3P49720 205 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 RAB2AP61019 212 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 SELENOTP62341 195 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 PAFAH1B2P68402 229 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 FGL1Q08830 312 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 C10orf113Q5VZT2 155 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 ZNF546Q86UE3 836 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 STX12Q86Y82 276 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 C1orf158Q8N1D5 194 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 EXOC3-AS1Q8N2X6 119 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 MUC7Q8TAX7 377 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 ATP5SQ99766 215 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 ZMAT4Q9H898 229 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 DNAJC4Q9NNZ3 241 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 ZNF331Q9NQX6 463 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-212ENST00000488774 CYTL1Q9NRR1 136 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 TNFSF18Q9UNG2 199 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 MUC4Q99102 2169 aa4.7□□□□□ -1.66
PTPRD-212ENST00000488774 FAT2Q9NYQ8 4349 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 TRAV12-2A0A075B6T6 113 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 IGHV4-28A0A0C4DH34 117 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 KIR2DL5BA0A0G2JN68 375 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 KIR2DL5BA0A0G2JPC4 375 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 ISLRO14498 428 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 OR10J4P0C629 311 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 CXCL2P19875 107 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 CNN1P51911 297 aaKnown RBP4.69□□□□□ -1.66
PTPRD-212ENST00000488774 CYCSP99999 105 aaKnown RBP4.69□□□□□ -1.66
PTPRD-212ENST00000488774 ERCC8Q13216 396 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 ZNF726P1Q15940 193 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 ATP6V1FQ16864 119 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 PRR9Q5T870 116 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 RPL7L1Q6DKI1 246 aaKnown RBP4.69□□□□□ -1.66
PTPRD-212ENST00000488774 Q6ZWC4 215 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 ZNF767PQ75MW2 155 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 STHQ8IWL8 128 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 BAP18Q8IXM2 172 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 KIR2DL5AQ8N109 375 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 OR2T35Q8NGX2 323 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 OR11H2Q8NH07 326 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 KIR2DL5BQ8NHK3 375 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 IL17DQ8TAD2 202 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 FXYD5Q96DB9 178 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 PHYHIPLQ96FC7 376 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 ST6GAL2Q96JF0 529 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 C16orf92Q96LL3 132 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 AQP10Q96PS8 301 aa4.69□□□□□ -1.66
PTPRD-212ENST00000488774 FXYD6-FXYD2A0A087WZ82 144 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 PLAC8L1A1L4L8 177 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 A6NJY4 79 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 ZNF705EA8MWA4 302 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-212ENST00000488774 CFDP00746 253 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-212ENST00000488774 RLN2P04090 185 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 CD5P06127 495 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 FABP1P07148 127 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 CT45A10P0DMU9 189 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 AZU1P20160 251 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 ATP6V0CP27449 155 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 BMI1P35226 326 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 GALR1P47211 349 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 AP2S1P53680 142 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-212ENST00000488774 APOC4P55056 127 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 NANOS2P60321 138 aaKnown RBP4.68□□□□□ -1.66
PTPRD-212ENST00000488774 RAP2BP61225 183 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 HBG1P69891 147 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 HBG2P69892 147 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 PSG3Q16557 428 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 SPINK13Q1W4C9 94 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 FFAR4Q5NUL3 377 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 Q6ZNX1 250 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 FOXI2Q6ZQN5 318 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 HSD17B11Q8NBQ5 300 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 OR4B1Q8NGF8 309 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 NARS2Q96I59 477 aaKnown RBP4.68□□□□□ -1.66
PTPRD-212ENST00000488774 SLC25A31Q9H0C2 315 aa4.68□□□□□ -1.66
PTPRD-212ENST00000488774 EPPK1P58107 5090 aaKnown RBP4.68□□□□□ -1.66
PTPRD-212ENST00000488774 DNAH17Q9UFH2 4485 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 hCG_2014768A0A024R1R8 64 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 TRBV19A0A075B6N1 114 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 IGKV2-40A0A087WW87 121 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-212ENST00000488774 SCGB2A1O75556 95 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 IGKV2D-40P01614 121 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-212ENST00000488774 RPL7P18124 248 aaKnown RBP4.67□□□□□ -1.66
PTPRD-212ENST00000488774 ATF4P18848 351 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-212ENST00000488774 SNRPD3P62318 126 aaKnown RBP4.67□□□□□ -1.66
PTPRD-212ENST00000488774 PMS2P11Q13670 270 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 ZNF705AQ6ZN79 300 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-212ENST00000488774 LINC00528Q8N1L1 170 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 RPP25LQ8N5L8 163 aaKnown RBP4.67□□□□□ -1.66
PTPRD-212ENST00000488774 ZNF738Q8NE65 137 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms