RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 NRGNQ92686 78 aa12.42□□□□□ -0.42
RAPGEF3-211ENST00000488250 TMEM18Q96B42 140 aa12.42□□□□□ -0.42
RAPGEF3-211ENST00000488250 NEU1Q99519 415 aa12.42□□□□□ -0.42
RAPGEF3-211ENST00000488250 A0A096LNT2 108 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 TRAV8-1A0A0A6YYK1 113 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 FAM231BA6NCW3 169 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 FAM223BA6NKX1 122 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 SPINK4O60575 86 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 P01737 135 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 ESDP10768 282 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 SLC35B1P78383 322 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 PSG3Q16557 428 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 C16orf54Q6UWD8 224 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 FAM223AQ8IWN6 122 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 OR4B1Q8NGF8 309 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 GFRA4Q9GZZ7 299 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 ZNF331Q9NQX6 463 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 A8MWL6 223 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 CRISP2P16562 243 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 MRPL54Q6P161 138 aaKnown RBP12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 PRNTQ86SH4 94 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 GSN-AS1Q9NRJ2 163 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 PSG8Q9UQ74 426 aa12.41□□□□□ -0.42
RAPGEF3-211ENST00000488250 SPG11Q96JI7 2443 aa12.4□□□□□ -0.42
RAPGEF3-211ENST00000488250 IGHG2P01859 326 aa12.4□□□□□ -0.42
RAPGEF3-211ENST00000488250 ATP5G2Q06055 141 aa12.4□□□□□ -0.42
RAPGEF3-211ENST00000488250 CRYBG3Q68DQ2 2970 aa12.4□□□□□ -0.42
RAPGEF3-211ENST00000488250 LINC01356Q8N9X3 169 aa12.4□□□□□ -0.42
RAPGEF3-211ENST00000488250 DAZAP1Q96EP5 407 aaKnown RBP12.4□□□□□ -0.42
RAPGEF3-211ENST00000488250 SOX21Q9Y651 276 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF3-211ENST00000488250 SMAD5-AS1Q9Y6J3 95 aa12.4□□□□□ -0.42
RAPGEF3-211ENST00000488250 GCN1Q92616 2671 aaKnown RBP12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 USP9YO00507 2555 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 FBLL1A6NHQ2 334 aaKnown RBP12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 HIGD1CA8MV81 97 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 H3BUA1 57 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 H3BUX3 64 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 CSN1S1P47710 185 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 JOSD1Q15040 202 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 CLEC19AQ6UXS0 136 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 TMEM256Q8N2U0 113 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 MS4A10Q96PG2 267 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 TP53TG3Q9ULZ0 132 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 A0A087X0K7 114 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 A0A1B0GXF2 115 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 GRIFINA4D1Z8 144 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 ZNF785A8K8V0 405 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 M0R3E3 92 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 BUB3O43684 328 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 AVPP01185 164 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 RELQ04864 619 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 CIARTQ8N365 385 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF3-211ENST00000488250 CLPSL1A2RUU4 121 aa12.38□□□□□ -0.43
RAPGEF3-211ENST00000488250 J3QLI3 93 aa12.38□□□□□ -0.43
RAPGEF3-211ENST00000488250 C1orf194Q5T5A4 169 aa12.38□□□□□ -0.43
RAPGEF3-211ENST00000488250 OR5R1Q8NH85 324 aa12.38□□□□□ -0.43
RAPGEF3-211ENST00000488250 APCSP02743 223 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 COL8A1P27658 744 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 RAB4BP61018 213 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 OR10J3Q5JRS4 329 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 COX8CQ7Z4L0 72 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 A0A1B0GUS0 222 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 J3QKU1 62 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 NUPR1O60356 82 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 PPIFP30405 207 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 FOXA3P55318 350 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 LINC00310P59036 64 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 LY6EQ16553 131 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 GTSF1Q8WW33 167 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 ZC2HC1AQ96GY0 325 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 ZNF580Q9UK33 172 aa12.37□□□□□ -0.43
RAPGEF3-211ENST00000488250 IGHV3-35A0A0C4DH35 117 aa12.36□□□□□ -0.43
RAPGEF3-211ENST00000488250 PAFAH1B2P68402 229 aa12.36□□□□□ -0.43
RAPGEF3-211ENST00000488250 RBPMS2Q6ZRY4 209 aaKnown RBP12.36□□□□□ -0.43
RAPGEF3-211ENST00000488250 GNB4Q9HAV0 340 aa12.36□□□□□ -0.43
RAPGEF3-211ENST00000488250 U3KQE9 123 aa12.36□□□□□ -0.43
RAPGEF3-211ENST00000488250 CENPEQ02224 2701 aa12.36□□□□□ -0.43
RAPGEF3-211ENST00000488250 TRGV3P03979 118 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 LOXL1Q08397 574 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 C9orf152Q5JTZ5 239 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 GDF5OSQ5U4N7 250 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 TCF24Q7RTU0 167 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 USMG5Q96IX5 58 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 A1L4Q6 167 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 IGHG4P01861 327 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 GZMBP10144 247 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 NOL4LQ96MY1 436 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 METTL26Q96S19 204 aa12.35□□□□□ -0.43
RAPGEF3-211ENST00000488250 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 CHEK1O14757 476 aa12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 SERF1AO75920 110 aa12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 HBBP68871 147 aa12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 SLAQ13239 276 aa12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 SAPCD1Q5SSQ6 148 aa12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 Q71RC1 249 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 OR2D3Q8NGH3 330 aa12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 BEX4Q9NWD9 120 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms