RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SPTAN1Q13813 2472 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 ABCA1O95477 2261 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 COL8A1P27658 744 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 EFNA4P52798 201 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 Q56UQ5 140 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 RBPMS2Q6ZRY4 209 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 NIT1Q86X76 327 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 Q8N976 141 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 PGLYRP4Q96LB8 373 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 C20orf144Q9BQM9 153 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 DOPEY1Q5JWR5 2465 aa14.1□□□□□ -0.15
PDLIM7-207ENST00000486828 IGHV2-70DA0A0C4DH43 119 aa14.1□□□□□ -0.15
PDLIM7-207ENST00000486828 PCP4P48539 62 aa14.1□□□□□ -0.15
PDLIM7-207ENST00000486828 TDRG1Q3Y452 100 aa14.1□□□□□ -0.15
PDLIM7-207ENST00000486828 OR2D3Q8NGH3 330 aa14.1□□□□□ -0.15
PDLIM7-207ENST00000486828 ZFP30Q9Y2G7 519 aa14.1□□□□□ -0.15
PDLIM7-207ENST00000486828 K7EQM0 130 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 NDUFB8O95169 186 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 EGR2P11161 476 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 BCL6BQ8N143 479 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 IGHV7-81A0A0B4J1V7 117 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 DIRC3C9JPN6 131 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 PDE6HQ13956 83 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 COTL1Q14019 142 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 Q71RC1 249 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 FAM19A2Q8N3H0 131 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 Q8N9W7 124 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 VAMP8Q9BV40 100 aa14.09□□□□□ -0.15
PDLIM7-207ENST00000486828 A0A1B0GV90 55 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 ZNF785A8K8V0 405 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 FAM106CPP0CH98 169 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 UBE2E1P51965 193 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 PSG3Q16557 428 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 ITLN2Q8WWU7 325 aaPredicted RBP14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 ZC2HC1AQ96GY0 325 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 C1RLQ9NZP8 487 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 PSG8Q9UQ74 426 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 COL12A1Q99715 3063 aa14.08□□□□□ -0.16
PDLIM7-207ENST00000486828 HRNRQ86YZ3 2850 aaPredicted RBP14.07□□□□□ -0.16
PDLIM7-207ENST00000486828 HSBP1O75506 76 aa14.07□□□□□ -0.16
PDLIM7-207ENST00000486828 SCGB2A1O75556 95 aa14.07□□□□□ -0.16
PDLIM7-207ENST00000486828 PLA2G2AP14555 144 aa14.07□□□□□ -0.16
PDLIM7-207ENST00000486828 NTF3P20783 257 aa14.07□□□□□ -0.16
PDLIM7-207ENST00000486828 AJUBAQ96IF1 538 aa14.07□□□□□ -0.16
PDLIM7-207ENST00000486828 PAM16Q9Y3D7 125 aa14.07□□□□□ -0.16
PDLIM7-207ENST00000486828 DCHS2Q6V1P9 2916 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 EREGO14944 169 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 IGHV3-23P01764 117 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 C3orf79P0CE67 100 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 FOXA3P55318 350 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 FAM120AOSQ5T036 256 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 BORCS7Q96B45 105 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 TXN2Q99757 166 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 AAMDCQ9H7C9 122 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 LRBAP50851 2863 aa14.06□□□□□ -0.16
PDLIM7-207ENST00000486828 OR2T8A6NH00 312 aa14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 LMO4P61968 165 aa14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 HELZ2Q9BYK8 2649 aaKnown RBP14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 M0R3E3 92 aa14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 HAX1O00165 279 aa14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 APOHP02749 345 aaPredicted RBP14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 CTSGP08311 255 aa14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 CFAP161Q6P656 301 aa14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 MIEN1Q9BRT3 115 aa14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 BPESC1Q9GZL8 116 aa14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 CHTOPQ9Y3Y2 248 aaKnown RBP14.05□□□□□ -0.16
PDLIM7-207ENST00000486828 OVOL3O00110 214 aa14.04□□□□□ -0.16
PDLIM7-207ENST00000486828 PSG9Q00887 426 aa14.04□□□□□ -0.16
PDLIM7-207ENST00000486828 FAM162BQ5T6X4 162 aa14.04□□□□□ -0.16
PDLIM7-207ENST00000486828 RNASEKQ6P5S7 137 aaKnown RBP14.04□□□□□ -0.16
PDLIM7-207ENST00000486828 SNHG12Q9BXW3 62 aa14.04□□□□□ -0.16
PDLIM7-207ENST00000486828 SERTM2A0A1B0GWG4 89 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 RPL7P18124 248 aaKnown RBP14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 SAA4P35542 130 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 C21orf62-AS1Q17RA5 79 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 PRR31Q5SQ13 230 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 FAM110DQ8TAY7 271 aaPredicted RBP14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 LPAR2Q9HBW0 351 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 SH2D7A6NKC9 451 aaPredicted RBP14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 C19orf84I3L1E1 186 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 M0R2Z0 102 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 CHEK1O14757 476 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 ZNF705AQ6ZN79 300 aaPredicted RBP14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 URB1-AS1Q96HZ7 61 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 ASCL2Q99929 193 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 RABAC1Q9UI14 185 aa14.03□□□□□ -0.16
PDLIM7-207ENST00000486828 M0R143 59 aa14.02□□□□□ -0.16
PDLIM7-207ENST00000486828 RAB4AP20338 218 aa14.02□□□□□ -0.16
PDLIM7-207ENST00000486828 CSN1S1P47710 185 aa14.02□□□□□ -0.16
PDLIM7-207ENST00000486828 CRIP1P50238 77 aa14.02□□□□□ -0.16
PDLIM7-207ENST00000486828 KLK9Q2XQG4 91 aa14.02□□□□□ -0.16
PDLIM7-207ENST00000486828 KLK9Q9UKQ9 250 aa14.02□□□□□ -0.16
PDLIM7-207ENST00000486828 FASNP49327 2511 aaKnown RBP14.02□□□□□ -0.17
PDLIM7-207ENST00000486828 LOC102724200A0A096LPH7 203 aaPredicted RBP14.02□□□□□ -0.17
PDLIM7-207ENST00000486828 FAM181BA6NEQ2 426 aa14.02□□□□□ -0.17
PDLIM7-207ENST00000486828 J3QKU1 62 aa14.02□□□□□ -0.17
PDLIM7-207ENST00000486828 PRB4P10163 310 aaPredicted RBP14.02□□□□□ -0.17
PDLIM7-207ENST00000486828 MRPL52Q86TS9 123 aaKnown RBP14.02□□□□□ -0.17
PDLIM7-207ENST00000486828 NDFIP1Q9BT67 221 aa14.02□□□□□ -0.17
PDLIM7-207ENST00000486828 A0A1B0GUT8 65 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms