RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 HECW2Q9P2P5 1572 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 MAP3K5Q99683 1374 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 TNS1Q9HBL0 1735 aaKnown RBP-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 ARHGEF11O15085 1522 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 SBF1O95248 1867 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 DOCK1Q14185 1865 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 RREB1Q92766 1687 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 TSC2P49815 1807 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 NUP98P52948 1817 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 ATP10BO94823 1461 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 PHRF1Q9P1Y6 1649 aaKnown RBP-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 TRAV26-2A0A0B4J265 109 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 A0A0G2JMM0 328 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 A0A1W2PPB8 328 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 A0A1W2PRS3 328 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 C20orf202A1L168 122 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 CCDC160A6NGH7 325 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 KIR3DP1A8MWS1 328 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 K7EIL1 84 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 ERC2-IT1O76042 136 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 TFF1P04155 84 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 DEFB121Q5J5C9 76 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 HRCT1Q6UXD1 115 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 Q8IYB0 196 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 FDCSPQ8NFU4 85 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 OPTNQ96CV9 577 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 TTTY10Q9BZA0 68 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 PRO3102Q9H379 93 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 MED29Q9NX70 200 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 S4R3F8 94 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 RGPD8O14715 1765 aaPredicted RBP-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 RGPD5Q99666 1765 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 NCOA1Q15788 1441 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 ATG2AQ2TAZ0 1938 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 PLXND1Q9Y4D7 1925 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 PCF11O94913 1555 aaKnown RBP-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 RFX7Q2KHR2 1363 aa-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 PRDM15P57071 1507 aaPredicted RBP-0.33□□□□□ -2.46
CCDC66-219ENST00000484441 MYO7BQ6PIF6 2116 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 ERCC6Q03468 1493 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 FYCO1Q9BQS8 1478 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 BCORQ6W2J9 1755 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 FXYD6-FXYD2A0A087WZ82 144 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 A0A096LNT2 108 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 LINC00959A0A1B0GUT2 108 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 LOC107986453A0A1B0GWG9 222 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 NUPR2A6NF83 97 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 CHD1O14646 1710 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 PROSCO94903 275 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 IFITM1P13164 125 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 PDE6GP18545 87 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 CASQ1P31415 396 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 SPINK7P58062 85 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 KRTAP26-1Q6PEX3 210 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 PPIP5K1Q6PFW1 1433 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 C10orf99Q6UWK7 81 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 DDI1Q8WTU0 396 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 CASKIN1Q8WXD9 1431 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 H1FXQ92522 213 aaKnown RBP-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 RAB8BQ92930 207 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 ISOC1Q96CN7 298 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 ERBINQ96RT1 1412 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 KIFC1Q9BW19 673 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 COMMD5Q9GZQ3 224 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 PLXNA4Q9HCM2 1894 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 ZNF142P52746 1687 aaPredicted RBP-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 ZNF831Q5JPB2 1677 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 RIMS1Q86UR5 1692 aaKnown RBP-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 PTPRDP23468 1912 aa-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 SIPA1L3O60292 1781 aaPredicted RBP-0.34□□□□□ -2.46
CCDC66-219ENST00000484441 WDR97A6NE52 1622 aa-0.35□□□□□ -2.46
CCDC66-219ENST00000484441 RIMBP3CA6NJZ7 1639 aa-0.35□□□□□ -2.46
CCDC66-219ENST00000484441 RIMBP3BA6NNM3 1639 aa-0.35□□□□□ -2.46
CCDC66-219ENST00000484441 RAPGEF2Q9Y4G8 1499 aa-0.35□□□□□ -2.46
CCDC66-219ENST00000484441 CDK5RAP2Q96SN8 1893 aa-0.35□□□□□ -2.46
CCDC66-219ENST00000484441 PRDM2Q13029 1718 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 BCORL1Q5H9F3 1711 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 PARP4Q9UKK3 1724 aaKnown RBP-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 MARF1Q9Y4F3 1742 aaKnown RBP-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 ARHGEF5Q12774 1597 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 MAST1Q9Y2H9 1570 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 SCN10AQ9Y5Y9 1956 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 DISP2A7MBM2 1401 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 NCOA3Q9Y6Q9 1424 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 FAM236AA0A1B0GUQ0 79 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 FAM236BA0A1B0GV22 79 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 BUB1B-PAK6H3BSN5 160 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 FXYD1O00168 92 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 IFNA5P01569 189 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 CRHP06850 196 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 OR5G3P0C626 314 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 BLVRAP53004 296 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 RPL37AP61513 92 aaKnown RBP-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 SKP1P63208 163 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 DEFB136Q30KP8 78 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 C1orf134Q5TEV5 83 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 FOXI2Q6ZQN5 318 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 ANGPTL5Q86XS5 388 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 HIST3H2BBQ8N257 126 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms