RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 IGHV3OR16-13A0A075B7E8 117 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 IGHV3-74A0A0B4J1X5 117 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 TRAV1-1A0A0B4J248 108 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 TRAV5A0A0B4J249 113 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 TRAV25A0A0B4J276 109 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 HMGB3O15347 200 aaKnown RBP6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 HIST1H1EP10412 219 aaKnown RBP6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 GCHFRP30047 84 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 PSMB3P49720 205 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 PPT1P50897 306 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 UBE2L3P68036 154 aaKnown RBP6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 PAFAH1B2P68402 229 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 IFITM2Q01629 132 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 PDE6HQ13956 83 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 PRR31Q5SQ13 230 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 LCN15Q6UWW0 184 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 RBPMS2Q6ZRY4 209 aaKnown RBP6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 SSX7Q7RTT5 188 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 TCF24Q7RTU0 167 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 WFDC9Q8NEX5 89 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 MLXQ9UH92 298 aa6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 NIPBLQ6KC79 2804 aaeCLIP6.83□□□□□ -1.32
SHROOM4-204ENST00000483955 TRAV2A0A0B4J234 112 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 ZNF785A8K8V0 405 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 MRPS12O15235 138 aaKnown RBP6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 ZNF253O75346 499 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 IFNA1P01562 189 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 IGLC2P0DOY2 106 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 EDN2P20800 178 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 RPL11P62913 178 aaKnown RBP6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 DEFB114Q30KQ6 69 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 FAM90A2PQ658T7 463 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 LCN12Q6JVE5 192 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 ADAMTSL5Q6ZMM2 481 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 FXYD5Q96DB9 178 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 ZNF503Q96F45 646 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 FAM210AQ96ND0 272 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 SPAG8Q99932 426 aaPredicted RBP6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 SLC50A1Q9BRV3 221 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 HRH4Q9H3N8 390 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 NRN1Q9NPD7 142 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 ZMAT5Q9UDW3 170 aaKnown RBP6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 ARL2-SNX15V9GYD0 113 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 NF1P21359 2839 aa6.82□□□□□ -1.32
SHROOM4-204ENST00000483955 TSPAN4O14817 238 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 NMBP08949 121 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 OR10J4P0C629 311 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 NBEAP1P0C6P0 100 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 PYYP10082 97 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 TAGLN2P37802 199 aaKnown RBP6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 FGF8P55075 233 aaPredicted RBP6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 CD300EQ496F6 205 aaPredicted RBP6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 CLLU1Q5K131 121 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 Q8N3U1 123 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 LYPD6BQ8NI32 183 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 SUN5Q8TC36 379 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 MANBALQ9NQG1 85 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 CLEC5AQ9NY25 188 aa6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 FBN1P35555 2871 aaKnown RBP6.81□□□□□ -1.32
SHROOM4-204ENST00000483955 TRBV19A0A075B6N1 114 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 A0A1B0GV50 99 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 A0A1W2PRE2 83 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 DNASE2O00115 360 aaPredicted RBP6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 EIF3GO75821 320 aaKnown RBP eCLIP6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 PSG9Q00887 426 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 TMEM61Q8N0U2 210 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 LYPD1Q8N2G4 141 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 BLNKQ8WV28 456 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 NKX6-2Q9C056 277 aaPredicted RBP6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 MS4A6AQ9H2W1 248 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 AAMDCQ9H7C9 122 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 ZNF586Q9NXT0 402 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 SMAD5-AS1Q9Y6J3 95 aa6.8□□□□□ -1.32
SHROOM4-204ENST00000483955 IGKV3-7A0A075B6H7 116 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 OR4C46A6NHA9 309 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 H3BQ15 152 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 ISLRO14498 428 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 ID1P41134 155 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 SNRPD3P62318 126 aaKnown RBP6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 DCANP1Q8TF63 244 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 MRPL53Q96EL3 112 aaKnown RBP6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 TXNDC17Q9BRA2 123 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 TCEAL7Q9BRU2 100 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 CDIP1Q9H305 208 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 ZNF331Q9NQX6 463 aaPredicted RBP6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 PRELID1Q9Y255 219 aa6.79□□□□□ -1.32
SHROOM4-204ENST00000483955 K7EQG2 157 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 SOCS3O14543 225 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 IGLL1P15814 213 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 GUCA2BQ16661 112 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 MAJINQ3KP22 176 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 PCNPQ8WW12 178 aaKnown RBP6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 Q9H3A6 140 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 TMPRSS5Q9H3S3 457 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 GNG13Q9P2W3 67 aa6.78□□□□□ -1.32
SHROOM4-204ENST00000483955 FAM74A7A6NL05 159 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms