RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SUPT4H1P63272 117 aaKnown RBP7.86□□□□□ -1.15
VEGFA-212ENST00000480614 FAM201AQ5SY85 155 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 VMO1Q7Z5L0 202 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 IGHV1-46P01743 117 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 GAGE1Q13065 139 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 NEGR1Q7Z3B1 354 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 LY6G5BQ8NDX9 201 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 SPACA3Q8IXA5 215 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 IGKV1D-13A0A0B4J2D9 117 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 IGHV1-8P0DP01 117 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 IGKV1-13P0DP09 117 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 MRPL27Q9P0M9 148 aaKnown RBP7.86□□□□□ -1.15
VEGFA-212ENST00000480614 RFNGQ9Y644 331 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 EDA2RQ9HAV5 297 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 BTCP35070 178 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 HIST1H4AP62805 103 aaKnown RBP7.86□□□□□ -1.15
VEGFA-212ENST00000480614 C1QCP02747 245 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 TRBV6-6A0A0A6YYG2 114 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 EREGO14944 169 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 SLC25A16P16260 332 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 GFI1BQ5VTD9 330 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 SPRR3Q9UBC9 169 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 TMEM178BH3BS89 294 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 TMEM155Q4W5P6 130 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 GFRA4Q9GZZ7 299 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 D6R8Y8 96 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 RBMY1FQ15415 496 aaKnown RBP7.85□□□□□ -1.15
VEGFA-212ENST00000480614 TPTE2P1Q5T6R2 138 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 RMI2Q96E14 147 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 TNFRSF6BO95407 300 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 CD55P08174 381 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 IL17RELQ6ZVW7 336 aa7.85□□□□□ -1.15
VEGFA-212ENST00000480614 NPIPB5A8MRT5 1133 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 PLSCR4Q9NRQ2 329 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 PMS2P5A8MQ11 134 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 TREML4Q6UXN2 200 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 PIP4P2Q8N4L2 257 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 RNF126Q9BV68 326 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 REG4Q9BYZ8 158 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 ZNF672Q499Z4 452 aaPredicted RBP7.84□□□□□ -1.15
VEGFA-212ENST00000480614 SNHG12Q9BXW3 62 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 IGHV1-3A0A0C4DH29 117 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 ACTL10Q5JWF8 245 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 LCN12Q6JVE5 192 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 PSG1P11464 419 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 RPL15P61313 204 aaKnown RBP7.84□□□□□ -1.15
VEGFA-212ENST00000480614 C1orf159Q96HA4 380 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 TRAV5A0A0B4J249 113 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 IGHV1-18A0A0C4DH31 117 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 ZNF876PQ49A33 203 aa7.84□□□□□ -1.15
VEGFA-212ENST00000480614 SRSF2Q01130 221 aaKnown RBP7.84□□□□□ -1.16
VEGFA-212ENST00000480614 LYZL4Q96KX0 146 aa7.84□□□□□ -1.16
VEGFA-212ENST00000480614 ZNF48Q96MX3 618 aaPredicted RBP7.84□□□□□ -1.16
VEGFA-212ENST00000480614 TCRAP04437 139 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 SFTA2Q6UW10 78 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 BCL6BQ8N143 479 aaPredicted RBP7.83□□□□□ -1.16
VEGFA-212ENST00000480614 ZFP36L1Q07352 338 aaKnown RBP7.83□□□□□ -1.16
VEGFA-212ENST00000480614 SPATA31B1PQ5VZV4 182 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 CSTL1Q9H114 145 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 BMPERQ8N8U9 685 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 LINC01356Q8N9X3 169 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 DAZ1Q9NQZ3 744 aaKnown RBP7.83□□□□□ -1.16
VEGFA-212ENST00000480614 DEPPQ9NTK1 212 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 SELLP14151 372 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 IGKV2-40A0A087WW87 121 aaPredicted RBP7.83□□□□□ -1.16
VEGFA-212ENST00000480614 IGKV2D-40P01614 121 aaPredicted RBP7.83□□□□□ -1.16
VEGFA-212ENST00000480614 CRYGSP22914 178 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 RIPPLY3P57055 190 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 PSG3Q16557 428 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 LY6G6FQ5SQ64 297 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 ZNF837Q96EG3 531 aaPredicted RBP7.83□□□□□ -1.16
VEGFA-212ENST00000480614 TMEM141Q96I45 108 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 IGKV1D-43A0A0B4J1Z2 117 aa7.83□□□□□ -1.16
VEGFA-212ENST00000480614 NMSQ5H8A3 153 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 SRD5A1P18405 259 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 IGKV1-9A0A0C4DH69 117 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 TMEM14EPQ6UXP3 125 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 EXOC3-AS1Q8N2X6 119 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 C20orf144Q9BQM9 153 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 ANKRD17O75179 2603 aaKnown RBP7.82□□□□□ -1.16
VEGFA-212ENST00000480614 GUSBP1Q15486 140 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 KLHL30-AS1Q8NEE0 82 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 NUP35Q8NFH5 326 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 TRPT1Q86TN4 253 aaKnown RBP7.82□□□□□ -1.16
VEGFA-212ENST00000480614 NDUFB8O95169 186 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 RPL35AP18077 110 aaKnown RBP7.82□□□□□ -1.16
VEGFA-212ENST00000480614 Q6ZS49 121 aa7.82□□□□□ -1.16
VEGFA-212ENST00000480614 TRBV20-1A0A075B6N2 111 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 MAJINQ3KP22 176 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 PRIMA1Q86XR5 153 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 IGHV3-64A0A075B6Q5 118 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 J3QRE1 110 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 TMEM200BQ69YZ2 307 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 LINC01551Q86U37 167 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 NKAPP1Q8N9T2 125 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 LSM4Q9Y4Z0 139 aaKnown RBP7.81□□□□□ -1.16
VEGFA-212ENST00000480614 C3orf36Q3SXR2 165 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 LYZL1Q6UWQ5 148 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 EXPH5Q8NEV8 1989 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms