RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 MRPS12O15235 138 aaKnown RBP14.27□□□□□ -0.12
CCM2-209ENST00000477605 LYNX1P0DP58 116 aa14.27□□□□□ -0.12
CCM2-209ENST00000477605 ZNF672Q499Z4 452 aaPredicted RBP14.27□□□□□ -0.12
CCM2-209ENST00000477605 KIR3DL3Q8N743 410 aa14.27□□□□□ -0.12
CCM2-209ENST00000477605 ZNF785A8K8V0 405 aa14.27□□□□□ -0.13
CCM2-209ENST00000477605 ZC2HC1AQ96GY0 325 aa14.27□□□□□ -0.13
CCM2-209ENST00000477605 ZNF414Q96IQ9 312 aa14.27□□□□□ -0.13
CCM2-209ENST00000477605 ONECUT1Q9UBC0 465 aa14.27□□□□□ -0.13
CCM2-209ENST00000477605 M0R1W7 72 aa14.26□□□□□ -0.13
CCM2-209ENST00000477605 NDUFB8O95169 186 aa14.26□□□□□ -0.13
CCM2-209ENST00000477605 SPATA12Q7Z6I5 190 aa14.26□□□□□ -0.13
CCM2-209ENST00000477605 CFHR4Q92496 578 aa14.26□□□□□ -0.13
CCM2-209ENST00000477605 MAP1LC3CQ9BXW4 147 aa14.26□□□□□ -0.13
CCM2-209ENST00000477605 NPIPB5A8MRT5 1133 aa14.26□□□□□ -0.13
CCM2-209ENST00000477605 SFTPCP11686 197 aa14.26□□□□□ -0.13
CCM2-209ENST00000477605 PRR30Q53SZ7 412 aaPredicted RBP14.26□□□□□ -0.13
CCM2-209ENST00000477605 FBLL1A6NHQ2 334 aaKnown RBP14.25□□□□□ -0.13
CCM2-209ENST00000477605 SIAH2O43255 324 aa14.25□□□□□ -0.13
CCM2-209ENST00000477605 IL4P05112 153 aa14.25□□□□□ -0.13
CCM2-209ENST00000477605 PRB3Q04118 309 aaPredicted RBP14.25□□□□□ -0.13
CCM2-209ENST00000477605 MFAP4P55083 255 aa14.24□□□□□ -0.13
CCM2-209ENST00000477605 MS4A6AQ9H2W1 248 aa14.24□□□□□ -0.13
CCM2-209ENST00000477605 HSBP1L1C9JCN9 74 aa14.24□□□□□ -0.13
CCM2-209ENST00000477605 M0QZ24 198 aa14.24□□□□□ -0.13
CCM2-209ENST00000477605 ZNF493Q6ZR52 646 aa14.24□□□□□ -0.13
CCM2-209ENST00000477605 LINC01560Q8TB33 94 aa14.24□□□□□ -0.13
CCM2-209ENST00000477605 TIMD4Q96H15 378 aa14.24□□□□□ -0.13
CCM2-209ENST00000477605 AAMDCQ9H7C9 122 aa14.24□□□□□ -0.13
CCM2-209ENST00000477605 BAHCC1Q9P281 2608 aa14.23□□□□□ -0.13
CCM2-209ENST00000477605 CT45A10P0DMU9 189 aa14.23□□□□□ -0.13
CCM2-209ENST00000477605 CD24P25063 80 aa14.23□□□□□ -0.13
CCM2-209ENST00000477605 HINT1P49773 126 aaPredicted RBP14.23□□□□□ -0.13
CCM2-209ENST00000477605 C5orf64Q2M2E5 130 aa14.23□□□□□ -0.13
CCM2-209ENST00000477605 LDLRAD2Q5SZI1 272 aa14.23□□□□□ -0.13
CCM2-209ENST00000477605 COX8CQ7Z4L0 72 aa14.23□□□□□ -0.13
CCM2-209ENST00000477605 NEU4Q8WWR8 484 aaPredicted RBP14.23□□□□□ -0.13
CCM2-209ENST00000477605 C17orf77Q96MU5 243 aa14.23□□□□□ -0.13
CCM2-209ENST00000477605 HELZ2Q9BYK8 2649 aaKnown RBP14.23□□□□□ -0.13
CCM2-209ENST00000477605 ODF3BA8MYP8 253 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 GNG7O60262 68 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 ARMS2P0C7Q2 107 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 FCGR2BP31994 310 aaPredicted RBP14.22□□□□□ -0.13
CCM2-209ENST00000477605 CSN1S1P47710 185 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 PSG9Q00887 426 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 IGFBPL1Q8WX77 278 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 IGLV11-55A0A075B6I3 123 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 SCGB2A1O75556 95 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 PRTN3P24158 256 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 ZNF562Q6V9R5 426 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 ZNF738Q8NE65 137 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 COX11Q9Y6N1 276 aa14.22□□□□□ -0.13
CCM2-209ENST00000477605 SPENQ96T58 3664 aaKnown RBP14.21□□□□□ -0.13
CCM2-209ENST00000477605 OOSP1A8MZH6 123 aa14.21□□□□□ -0.13
CCM2-209ENST00000477605 TOX4O94842 621 aa14.21□□□□□ -0.13
CCM2-209ENST00000477605 PLA2G2AP14555 144 aa14.21□□□□□ -0.13
CCM2-209ENST00000477605 CRIP1P50238 77 aa14.21□□□□□ -0.13
CCM2-209ENST00000477605 C1orf122Q6ZSJ8 110 aa14.21□□□□□ -0.13
CCM2-209ENST00000477605 TTC9CQ8N5M4 171 aa14.21□□□□□ -0.13
CCM2-209ENST00000477605 TMUB1Q9BVT8 246 aa14.21□□□□□ -0.13
CCM2-209ENST00000477605 AP5S1Q9NUS5 200 aa14.21□□□□□ -0.13
CCM2-209ENST00000477605 S100A7P31151 101 aa14.21□□□□□ -0.14
CCM2-209ENST00000477605 CCDC144NLQ6NUI1 221 aa14.21□□□□□ -0.14
CCM2-209ENST00000477605 LINC00173Q6ZV60 143 aa14.21□□□□□ -0.14
CCM2-209ENST00000477605 FANCD2OSQ96PS1 177 aa14.21□□□□□ -0.14
CCM2-209ENST00000477605 THYN1Q9P016 225 aa14.21□□□□□ -0.14
CCM2-209ENST00000477605 ARFGEF3Q5TH69 2177 aa14.2□□□□□ -0.14
CCM2-209ENST00000477605 GCN1Q92616 2671 aaKnown RBP14.2□□□□□ -0.14
CCM2-209ENST00000477605 ARF6P62330 175 aa14.2□□□□□ -0.14
CCM2-209ENST00000477605 SAPCD1Q5SSQ6 148 aa14.2□□□□□ -0.14
CCM2-209ENST00000477605 LINC01545Q5VT33 79 aa14.2□□□□□ -0.14
CCM2-209ENST00000477605 SLC25A34Q6PIV7 304 aa14.2□□□□□ -0.14
CCM2-209ENST00000477605 HILPDAQ9Y5L2 63 aa14.2□□□□□ -0.14
CCM2-209ENST00000477605 LOC105371242A0A075B767 164 aa14.19□□□□□ -0.14
CCM2-209ENST00000477605 RPL7P18124 248 aaKnown RBP14.19□□□□□ -0.14
CCM2-209ENST00000477605 PRR31Q5SQ13 230 aa14.19□□□□□ -0.14
CCM2-209ENST00000477605 FA2HQ7L5A8 372 aa14.19□□□□□ -0.14
CCM2-209ENST00000477605 U3KQK5 164 aa14.19□□□□□ -0.14
CCM2-209ENST00000477605 OR10AG1Q8NH19 301 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 ARPC1AQ92747 370 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 C21orf62Q9NYP8 219 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 PLXNB1O43157 2135 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 MALRD1Q5VYJ5 2156 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 TMEM189A5PLL7 270 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 RPS20P60866 119 aaKnown RBP14.18□□□□□ -0.14
CCM2-209ENST00000477605 Q71RC1 249 aaPredicted RBP14.18□□□□□ -0.14
CCM2-209ENST00000477605 PRSS3P2Q8NHM4 247 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 PMCHL2Q9BQD1 86 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 SCRT2Q9NQ03 307 aa14.18□□□□□ -0.14
CCM2-209ENST00000477605 FAM90A27PA6NNH2 459 aa14.17□□□□□ -0.14
CCM2-209ENST00000477605 ZNF138P52744 262 aa14.17□□□□□ -0.14
CCM2-209ENST00000477605 UBE2V1Q13404 147 aa14.17□□□□□ -0.14
CCM2-209ENST00000477605 EBI3Q14213 229 aa14.17□□□□□ -0.14
CCM2-209ENST00000477605 HES1Q14469 280 aa14.17□□□□□ -0.14
CCM2-209ENST00000477605 ZNF747Q9BV97 191 aa14.17□□□□□ -0.14
CCM2-209ENST00000477605 RP1L1Q8IWN7 2480 aaPredicted RBP14.17□□□□□ -0.14
CCM2-209ENST00000477605 ZGRF1Q86YA3 2104 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 hDV102S1A0JD36 115 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 M0R3E3 92 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 TCF21O43680 179 aa14.16□□□□□ -0.14
CCM2-209ENST00000477605 MINOS1Q5TGZ0 78 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms