RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 PPIBP23284 216 aaKnown RBP1.03□□□□□ -2.24
VPS50-213ENST00000477572 CRHBPP24387 322 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 ATP6V0CP27449 155 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 INPP1P49441 399 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 PSMB3P49720 205 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 AKR1C2P52895 323 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 ARPP19P56211 112 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 MYL5Q02045 173 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 BSPH1Q075Z2 132 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 CATR1Q13166 79 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 DIAPH2-AS1Q14236 149 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 SS18Q15532 418 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 Q6Q795 121 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 LCN15Q6UWW0 184 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 SDIM1Q6ZPB5 146 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 ZNF720Q7Z2F6 126 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 KTN1-AS1Q86SY8 53 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 PRR15Q8IV56 129 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 C1orf174Q8IYL3 243 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TEX29Q8N6K0 151 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 PACRGLQ8N7B6 248 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 NUP35Q8NFH5 326 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 OR5D14Q8NGL3 314 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 LCN9Q8WX39 176 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 OR4C12Q96R67 309 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 NMNAT3Q96T66 252 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 SLC25A21Q9BQT8 299 aaPredicted RBP1.03□□□□□ -2.24
VPS50-213ENST00000477572 ZNF471Q9BX82 626 aaPredicted RBP1.03□□□□□ -2.24
VPS50-213ENST00000477572 MED9Q9NWA0 146 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 FBXL12Q9NXK8 326 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TP73-AS1Q9UF72 201 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 LINC00527Q9UJ94 153 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 RNF11Q9Y3C5 154 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 KTN1Q86UP2 1357 aaKnown RBP1.03□□□□□ -2.24
VPS50-213ENST00000477572 DAPK1P53355 1430 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 UACAQ9BZF9 1416 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TRAPPC8Q9Y2L5 1435 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 A2ML1A8K2U0 1454 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 FANCAO15360 1455 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 POLA1P09884 1462 aaPredicted RBP1.03□□□□□ -2.24
VPS50-213ENST00000477572 LMTK2Q8IWU2 1503 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 KDM5CP41229 1560 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 NRKQ7Z2Y5 1582 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TMEM131LA2VDJ0 1609 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 CC2D2AQ9P2K1 1620 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 KNDC1Q76NI1 1749 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 LAMB2P55268 1798 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 SBF2Q86WG5 1849 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 DOCK2Q92608 1830 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 OBSL1O75147 1896 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 ANK1P16157 1881 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 DOCK1Q14185 1865 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 MCM3APO60318 1980 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 HEATR5AQ86XA9 2040 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 CCDC88CQ9P219 2028 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 RTTNQ86VV8 2226 aa1.03□□□□□ -2.25
VPS50-213ENST00000477572 RP1L1Q8IWN7 2480 aaPredicted RBP1.03□□□□□ -2.25
VPS50-213ENST00000477572 IGHV3OR15-7A0A075B7D8 119 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 A0A087X0T9 212 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 A0A0J9YW62 118 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 PNMA8CA0A1B0GUJ8 204 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 A0A1W2PRS3 328 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 C19orf71A6NCJ1 209 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 DPRXA6NFQ7 191 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 BBIP1A8MTZ0 92 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 J3QRK9 145 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 COX7A2LO14548 114 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 CDC42EP2O14613 210 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 GSTZ1O43708 216 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 PPLO60437 1756 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 APOMO95445 188 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 SOD1P00441 154 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 LTAP01374 205 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 TRGC2P03986 189 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 SPINK8P0C7L1 97 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 TRAPPC2P0DI81 140 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 TRAPPC2BP0DI82 140 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 CTSEP14091 401 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 OR10J1P30954 320 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 OPRM1P35372 400 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 GUCA1AP43080 201 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 DAPP51397 102 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 AQP4P55087 323 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 FOXA3P55318 350 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 TPPP2P59282 170 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 UBA52P62987 128 aaKnown RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 HOXC5Q00444 222 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 NAIPQ13075 1403 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 MSMO1Q15800 293 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 RTL8BQ17RB0 113 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 EBLN2Q6P2I7 272 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 ZNF705AQ6ZN79 300 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 FOXI2Q6ZQN5 318 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 Q6ZS49 121 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 SSX8Q7RTT4 187 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 RGPD4Q7Z3J3 1758 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 TRAPPC6BQ86SZ2 158 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 RPP25LQ8N5L8 163 aaKnown RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 TTC9CQ8N5M4 171 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 WFDC11Q8NEX6 87 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms