RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PARD6GQ9BYG4 376 aaPredicted RBP4.62□□□□□ -1.67
RTFDC1-206ENST00000477485 TMPRSS5Q9H3S3 457 aa4.62□□□□□ -1.67
RTFDC1-206ENST00000477485 SHPKQ9UHJ6 478 aa4.62□□□□□ -1.67
RTFDC1-206ENST00000477485 SCP2D1Q9UJQ7 156 aa4.62□□□□□ -1.67
RTFDC1-206ENST00000477485 SLC45A2Q9UMX9 530 aa4.62□□□□□ -1.67
RTFDC1-206ENST00000477485 HIGD1AQ9Y241 93 aa4.62□□□□□ -1.67
RTFDC1-206ENST00000477485 MRPS16Q9Y3D3 137 aaKnown RBP4.62□□□□□ -1.67
RTFDC1-206ENST00000477485 HSPG2P98160 4391 aa4.62□□□□□ -1.67
RTFDC1-206ENST00000477485 TRGV2A0A075B6R0 118 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 H3BRN7 92 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 H7BYZ3 331 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 SIVA1O15304 175 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 MED6O75586 246 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 RPL7P18124 248 aaKnown RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 HAMPP81172 84 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 MRPS10P82664 201 aaKnown RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 SSBP1Q04837 148 aaKnown RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 PSG3Q16557 428 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 TMEM182Q6ZP80 229 aaPredicted RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 ZNF493Q6ZR52 646 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 ACOT7LQ6ZUV0 252 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 RNASE8Q8TDE3 154 aaKnown RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 RPUSD4Q96CM3 377 aaKnown RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 C17orf77Q96MU5 243 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 C18orf15Q96N68 181 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 CIB3Q96Q77 187 aaPredicted RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 UPK3BQ9BT76 320 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 NAA50Q9GZZ1 169 aaKnown RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 MDFICQ9P1T7 246 aa4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
RTFDC1-206ENST00000477485 A0A096LPF7 62 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 TRAV12-3A0A0B4J271 114 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 H3BTX0 84 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 HYPMO75409 117 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 NXPH4O95158 308 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 LINC00869P0C866 280 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 DNAH10OSP0CZ25 163 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 CXCL3P19876 107 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 RRAS2P62070 204 aaPredicted RBP4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 ICAM4Q14773 271 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 KIR3DS1Q14943 382 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 CYP2G1PQ6ZSU1 146 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 SMIM4Q8WVI0 70 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 ZNF503Q96F45 646 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 DIRAS2Q96HU8 199 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 SHANK2-AS3Q9BTD1 123 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 ARL6Q9H0F7 186 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 MIXL1Q9H2W2 232 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 STRAPQ9Y3F4 350 aaKnown RBP4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 TNFRSF18Q9Y5U5 241 aa4.6□□□□□ -1.67
RTFDC1-206ENST00000477485 TRGV1A0A0A0MS02 117 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 PIGBOS1A0A0B4J2F0 54 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 PMS2P5A8MQ11 134 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 FAM229AH3BQW9 127 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 CTDSP2O14595 271 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 SYNGR2O43760 224 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 IGHV3-53P01767 116 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 HOXB5P09067 269 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 XGP55808 180 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 GFI1BQ5VTD9 330 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 CDPF1Q6NVV7 123 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 Q6ZTI0 123 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 S100A7AQ86SG5 101 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 ICOSQ9Y6W8 199 aa4.59□□□□□ -1.67
RTFDC1-206ENST00000477485 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 DUXBA0A1W2PPF3 345 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 ANKRD20A5PA0PJZ0 165 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 H3BNG1 76 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 SSSCA1O60232 199 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 SCGB1D2O95969 90 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 LEPP41159 167 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 KRTAP10-1P60331 282 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 CTF1Q16619 201 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 LCN15Q6UWW0 184 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 Q6ZRN7 208 aaPredicted RBP4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 Q6ZSN1 163 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 NFE4Q86UQ8 179 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 C20orf144Q9BQM9 153 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 SLC50A1Q9BRV3 221 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 ARV1Q9H2C2 271 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 PSENENQ9NZ42 101 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 MGAT4CQ9UBM8 478 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 RABL2BQ9UNT1 228 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 FUT9Q9Y231 359 aa4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 APOBP04114 4563 aaKnown RBP4.58□□□□□ -1.68
RTFDC1-206ENST00000477485 TRAV9-2A0A087WT02 112 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 A0A087WTM6 91 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 A0A087X0K7 114 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 PRAC2D3DTV9 90 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 PRSS46E5RG02 174 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 SLC17A3O00476 420 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 GOSR2O14653 212 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 PAX4O43316 350 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 PSCAO43653 123 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 COX7A2P2O60397 106 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 PITX3O75364 302 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 GCSHP23434 173 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 FAUP35544 74 aaKnown RBP4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 SELENOTP62341 195 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms