RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SIGLEC15Q6ZMC9 328 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 PRNTQ86SH4 94 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 GTSF1Q8WW33 167 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 ZNF414Q96IQ9 312 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 CRYBG3Q68DQ2 2970 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 ABCA1O95477 2261 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 DIRC3C9JPN6 131 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 TMEM11P17152 192 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 FOXA3P55318 350 aaPredicted RBP12.91□□□□□ -0.34
TMEM53-208ENST00000476724 LMO4P61968 165 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 KLF17Q5JT82 389 aaPredicted RBP12.91□□□□□ -0.34
TMEM53-208ENST00000476724 C16orf54Q6UWD8 224 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 MRPL52Q86TS9 123 aaKnown RBP12.91□□□□□ -0.34
TMEM53-208ENST00000476724 DYNAPQ8N1N2 210 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 C21orf62Q9NYP8 219 aa12.91□□□□□ -0.34
TMEM53-208ENST00000476724 TRAV8-1A0A0A6YYK1 113 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 NIT1Q86X76 327 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 CIARTQ8N365 385 aaPredicted RBP12.9□□□□□ -0.34
TMEM53-208ENST00000476724 OR2D3Q8NGH3 330 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 WNK2Q9Y3S1 2297 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 SERTM2A0A1B0GWG4 89 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 HSBP1O75506 76 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 FAM106CPP0CH98 169 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 S100A7P31151 101 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 Q56UQ5 140 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 ARL6IP6Q8N6S5 226 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 PGLYRP4Q96LB8 373 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 TXN2Q99757 166 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 MIEN1Q9BRT3 115 aa12.9□□□□□ -0.34
TMEM53-208ENST00000476724 CSMD2Q7Z408 3487 aa12.9□□□□□ -0.35
TMEM53-208ENST00000476724 LRRK2Q5S007 2527 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 PSG3Q16557 428 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 Q8N976 141 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 C17orf77Q96MU5 243 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 SSBP4Q9BWG4 385 aaPredicted RBP12.89□□□□□ -0.35
TMEM53-208ENST00000476724 AAMDCQ9H7C9 122 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 PSG8Q9UQ74 426 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 SPG11Q96JI7 2443 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 A0A1B0GV90 55 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 F8W735 103 aaPredicted RBP12.89□□□□□ -0.35
TMEM53-208ENST00000476724 M0R143 59 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 UBE2E1P51965 193 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 FBLN7Q53RD9 439 aa12.89□□□□□ -0.35
TMEM53-208ENST00000476724 KMT2BQ9UMN6 2715 aaPredicted RBP12.88□□□□□ -0.35
TMEM53-208ENST00000476724 IGHV2-70DA0A0C4DH43 119 aa12.88□□□□□ -0.35
TMEM53-208ENST00000476724 HAX1O00165 279 aa12.88□□□□□ -0.35
TMEM53-208ENST00000476724 TOX4O94842 621 aa12.88□□□□□ -0.35
TMEM53-208ENST00000476724 COX6B1P14854 86 aa12.88□□□□□ -0.35
TMEM53-208ENST00000476724 NDPQ00604 133 aa12.88□□□□□ -0.35
TMEM53-208ENST00000476724 PSG9Q00887 426 aa12.88□□□□□ -0.35
TMEM53-208ENST00000476724 RNF114Q9Y508 228 aa12.88□□□□□ -0.35
TMEM53-208ENST00000476724 ABCA2Q9BZC7 2435 aa12.88□□□□□ -0.35
TMEM53-208ENST00000476724 C3orf79P0CE67 100 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 NTF3P20783 257 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 TDRG1Q3Y452 100 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 FAM19A2Q8N3H0 131 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 PAM16Q9Y3D7 125 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 IGHV7-81A0A0B4J1V7 117 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 RPL7P18124 248 aaKnown RBP12.87□□□□□ -0.35
TMEM53-208ENST00000476724 RAB4AP20338 218 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 CSN1S1P47710 185 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 ATP5J2P56134 94 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 SSTP61278 116 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 DMRTA1Q5VZB9 504 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 CYB5R2Q6BCY4 276 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 Q8N9W7 124 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 S4R3C0 116 aa12.87□□□□□ -0.35
TMEM53-208ENST00000476724 FBLL1A6NHQ2 334 aaKnown RBP12.86□□□□□ -0.35
TMEM53-208ENST00000476724 M0QZK8 103 aa12.86□□□□□ -0.35
TMEM53-208ENST00000476724 CHEK1O14757 476 aa12.86□□□□□ -0.35
TMEM53-208ENST00000476724 NDUFB8O95169 186 aa12.86□□□□□ -0.35
TMEM53-208ENST00000476724 EGR2P11161 476 aaPredicted RBP12.86□□□□□ -0.35
TMEM53-208ENST00000476724 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
TMEM53-208ENST00000476724 ZC2HC1AQ96GY0 325 aa12.86□□□□□ -0.35
TMEM53-208ENST00000476724 LPAR2Q9HBW0 351 aa12.86□□□□□ -0.35
TMEM53-208ENST00000476724 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
TMEM53-208ENST00000476724 Q6AWC8 147 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 ZNF705AQ6ZN79 300 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-208ENST00000476724 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
TMEM53-208ENST00000476724 SNHG12Q9BXW3 62 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 IGHV4-61A0A0C4DH41 118 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 A0A1B0GW15 77 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 M0R2Z0 102 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 PMCHL1Q16048 86 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 RNASEKQ6P5S7 137 aaKnown RBP12.85□□□□□ -0.35
TMEM53-208ENST00000476724 C10orf105Q8TEF2 133 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 PIMREGQ9BSJ6 248 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 FBN2P35556 2912 aa12.85□□□□□ -0.35
TMEM53-208ENST00000476724 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 APOHP02749 345 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-208ENST00000476724 CTSGP08311 255 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 RIGQ13278 110 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-208ENST00000476724 RABAC1Q9UI14 185 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 NBPF19A0A087WUL8 3843 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 IGHV4-30-2A0A087WSY4 118 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 LOC102724200A0A096LPH7 203 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms