RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ADAT1Q9BUB4 502 aaKnown RBP1.96□□□□□ -2.1
PTCD3-211ENST00000476215 TLNRD1Q9H1K6 362 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 OR51V1Q9H2C8 321 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 OR51I2Q9H344 312 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 C16orf95Q9H693 158 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 TUBA4BQ9H853 241 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 ARMC1Q9NVT9 282 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 VPREB3Q9UKI3 123 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 MPC1Q9Y5U8 109 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 COL7A1Q02388 2944 aa1.96□□□□□ -2.1
PTCD3-211ENST00000476215 TMEM269A0A1B0GVZ9 245 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 ARRDC5A6NEK1 342 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 TMEM210A6NLX4 147 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 TMEM250H0YL14 139 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 GNGT2O14610 69 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 NPFFO15130 113 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 FABP7O15540 132 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 FGF16O43320 207 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 NOS1APO75052 506 aaPredicted RBP1.95□□□□□ -2.1
PTCD3-211ENST00000476215 TFF1P04155 84 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 ALOX5APP20292 161 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 HSD11B1P28845 292 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 MP68P56378 58 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 CAV3P56539 151 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 RAB2AP61019 212 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 PRB3Q04118 309 aaPredicted RBP1.95□□□□□ -2.1
PTCD3-211ENST00000476215 PRDX4Q13162 271 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 SNCBQ16143 134 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 FAM162BQ5T6X4 162 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 SSX7Q7RTT5 188 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 SLC36A1Q7Z2H8 476 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 FAM216BQ8N7L0 139 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 OR5A2Q8NGI9 324 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 OR5C1Q8NGR4 320 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 OR2T27Q8NH04 317 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 TEX47Q8TBZ9 253 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 CANT1Q8WVQ1 401 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 AQP3Q92482 292 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 GAFA1Q96PS6 74 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 RTL8AQ9BWD3 113 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 YIPF3Q9GZM5 350 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 ALX4Q9H161 411 aaPredicted RBP1.95□□□□□ -2.1
PTCD3-211ENST00000476215 METTL8Q9H825 291 aaKnown RBP1.95□□□□□ -2.1
PTCD3-211ENST00000476215 RASL12Q9NYN1 266 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 TVP23BQ9NYZ1 205 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 HSPE1-MOB4S4R3N1 261 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 TANC2Q9HCD6 1990 aa1.95□□□□□ -2.1
PTCD3-211ENST00000476215 KMT2CQ8NEZ4 4911 aaKnown RBP1.94□□□□□ -2.1
PTCD3-211ENST00000476215 TCRBV3S1A0A5B6 114 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 RFPL4AA6NLU0 287 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 RFPL4AL1F8VTS6 287 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 M0R1W7 72 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 SYNGR1O43759 233 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 SLC25A20O43772 301 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 E2F6O75461 281 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 FAM107AO95990 144 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 IGLV3-1P01715 115 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 FBP1P09467 338 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 AKR1C4P17516 323 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 GABRA2P47869 451 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 RAB13P51153 203 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 DAPP51397 102 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 DLX6P56179 175 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 GNG3P63215 75 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 KLRD1Q13241 179 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 CLVS2Q5SYC1 327 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 AADACL4Q5VUY2 407 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 HAGHLQ6PII5 290 aaPredicted RBP1.94□□□□□ -2.1
PTCD3-211ENST00000476215 TCF23Q7RTU1 214 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 ANGPTL5Q86XS5 388 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 OR8B12Q8NGG6 310 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 ASB17Q8WXJ9 295 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 H1FXQ92522 213 aaKnown RBP1.94□□□□□ -2.1
PTCD3-211ENST00000476215 RORBQ92753 470 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 MROQ9BYG7 248 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 PBOV1Q9GZY1 135 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 GPR84Q9NQS5 396 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 C19orf12Q9NSK7 152 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 FAM206AQ9NX38 181 aa1.94□□□□□ -2.1
PTCD3-211ENST00000476215 TRGV4A0A0C4DH28 118 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 PQLC2LA1A4F0 135 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 A6NIN4 97 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 METTL15A6NJ78 407 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 C17orf98A8MV24 154 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 ZNF670-ZNF695F2Z2N8 137 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 G3V2T6 193 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 H3BUX3 64 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 CRXO43186 299 aaPredicted RBP1.93□□□□□ -2.1
PTCD3-211ENST00000476215 APOA1P02647 267 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 TTRP02766 147 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 CCL1P22362 96 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 HAAOP46952 286 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 INPP1P49441 399 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 CXCR4P61073 352 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 EMX1Q04741 257 aaPredicted RBP1.93□□□□□ -2.1
PTCD3-211ENST00000476215 FLOT2Q14254 428 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 LRRC75BQ2VPJ9 315 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 SMIM21Q3B7S5 101 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 BCL2L15Q5TBC7 163 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 TMEM42Q69YG0 159 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms