RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 DIRC3C9JPN6 131 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 OVOL3O00110 214 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
CCDC66-216ENST00000476142 PSG3Q16557 428 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 BRD3OSQ6XYD6 125 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 REC114Q7Z4M0 266 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 ATP5L2Q7Z4Y8 100 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 TMEM75Q8N9X5 138 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 C18orf32Q8TCD1 76 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 RABAC1Q9UI14 185 aa6.98□□□□□ -1.29
CCDC66-216ENST00000476142 HAX1O00165 279 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 CSN1S1P47710 185 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 FOXA3P55318 350 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 SSTP61278 116 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 CT83Q5H943 113 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 IGFL4Q6B9Z1 124 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 RNASEKQ6P5S7 137 aaKnown RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 RBPMS2Q6ZRY4 209 aaKnown RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 LYPD1Q8N2G4 141 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 ZNF48Q96MX3 618 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 NRN1Q9NPD7 142 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 RNF114Q9Y508 228 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 CACNA1BQ00975 2339 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 IGHV3-66A0A0C4DH42 116 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 A0A1B0GXF2 115 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 ZNF324O75467 553 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 CLEC3BP05452 202 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 RPL7P18124 248 aaKnown RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 FAM110DQ8TAY7 271 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 C8orf49Q96NF6 230 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 PIMREGQ9BSJ6 248 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 IGKV2-40A0A087WW87 121 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 TRAV40A0A0B4J280 105 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 IGHV4-61A0A0C4DH41 118 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 CHEK1O14757 476 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 IGKV2D-40P01614 121 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-216ENST00000476142 TDRG1Q3Y452 100 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 CLEC19AQ6UXS0 136 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 LINC00527Q9UJ94 153 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 ZFP30Q9Y2G7 519 aa6.97□□□□□ -1.29
CCDC66-216ENST00000476142 COL12A1Q99715 3063 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 IGHV3OR16-13A0A075B7E8 117 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 TMSB15BA0A087X1C1 80 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 IGHV3-74A0A0B4J1X5 117 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 HSBP1O75506 76 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 CT45A10P0DMU9 189 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 ALKBH7Q9BT30 221 aaPredicted RBP6.96□□□□□ -1.3
CCDC66-216ENST00000476142 PAM16Q9Y3D7 125 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 M0QZ24 198 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 ATP5J2P56134 94 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 PSG9Q00887 426 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 PDE6HQ13956 83 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 OR4B1Q8NGF8 309 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 ZNF502Q8TBZ5 544 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 GFRA4Q9GZZ7 299 aa6.96□□□□□ -1.3
CCDC66-216ENST00000476142 IGHV3-49A0A0A0MS15 119 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 ZNF785A8K8V0 405 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 NPIPB6E9PJ23 425 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 HLA-DMBP28068 263 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 C1orf194Q5T5A4 169 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 BORCS7Q96B45 105 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 TXN2Q99757 166 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 NDUFAF3Q9BU61 184 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 VAMP8Q9BV40 100 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 VPS13CQ709C8 3753 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 M0R2Z0 102 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 ZNF207O43670 478 aaKnown RBP6.95□□□□□ -1.3
CCDC66-216ENST00000476142 LY6EQ16553 131 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 CLEC2AQ6UVW9 174 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 C5orf56Q8N8D9 126 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 Q8TAT8 98 aa6.95□□□□□ -1.3
CCDC66-216ENST00000476142 SOX21Q9Y651 276 aaPredicted RBP6.95□□□□□ -1.3
CCDC66-216ENST00000476142 CFAP46Q8IYW2 2715 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 IGHV1-69DA0A0B4J2H0 117 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 TRBV6-1A0A0K0K1D8 114 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 GOSR1O95249 250 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 IGHV1-69P01742 117 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 PAX1P15863 534 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 CRIP1P50238 77 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 RELQ04864 619 aaPredicted RBP6.94□□□□□ -1.3
CCDC66-216ENST00000476142 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 SMAD5-AS1Q9Y6J3 95 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 ARMS2P0C7Q2 107 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 PAX8Q06710 450 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
CCDC66-216ENST00000476142 ZNF705AQ6ZN79 300 aaPredicted RBP6.94□□□□□ -1.3
CCDC66-216ENST00000476142 NIT1Q86X76 327 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 EEF1AKMT3Q96AZ1 226 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 CCDC140Q96MF4 163 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 MOB4Q9Y3A3 225 aa6.94□□□□□ -1.3
CCDC66-216ENST00000476142 IGHV4-30-2A0A087WSY4 118 aa6.93□□□□□ -1.3
CCDC66-216ENST00000476142 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
CCDC66-216ENST00000476142 KIR2DL5BA0A0G2JN68 375 aa6.93□□□□□ -1.3
CCDC66-216ENST00000476142 KIR2DL5BA0A0G2JPC4 375 aa6.93□□□□□ -1.3
CCDC66-216ENST00000476142 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
CCDC66-216ENST00000476142 A0A1B0GUT8 65 aa6.93□□□□□ -1.3
CCDC66-216ENST00000476142 C3orf79P0CE67 100 aa6.93□□□□□ -1.3
CCDC66-216ENST00000476142 RNF224P0DH78 156 aa6.93□□□□□ -1.3
CCDC66-216ENST00000476142 IGHV4-38-2P0DP08 117 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms