RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 FBN2P35556 2912 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 MAP1AP78559 2803 aaPredicted RBP11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 PSG9Q00887 426 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 MBD6Q96DN6 1003 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 PRDM13Q9H4Q3 707 aa11.92□□□□□ -0.5
RPUSD3-215ENST00000475470 IGLV2-11P01706 119 aa11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 BLCAPP62952 87 aa11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 MRPL18Q9H0U6 180 aaKnown RBP11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 ZFHX3Q15911 3703 aa11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 IZUMO1RA6ND01 250 aa11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 SNURFLB1AK76 121 aa11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 RELQ04864 619 aaPredicted RBP11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 TMEM75Q8N9X5 138 aa11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 DAZAP1Q96EP5 407 aaKnown RBP11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 NOL4LQ96MY1 436 aaPredicted RBP11.91□□□□□ -0.5
RPUSD3-215ENST00000475470 TRBV6-1A0A0K0K1D8 114 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 DIRC3C9JPN6 131 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 M0R3E3 92 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 FRMD6-AS1P0C7T7 363 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 CSN1S1P47710 185 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 TPPP2P59282 170 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 GNB1LQ9BYB4 327 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 CSMD2Q7Z408 3487 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 RAB9AP51151 201 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 DEFB112Q30KQ8 113 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 Q5PR19 223 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 MRPL54Q6P161 138 aaKnown RBP11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 WDR73Q6P4I2 378 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 LRRC75A-AS1Q8N1F1 130 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 ATP6V0BQ99437 205 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 PRO1933Q9H354 126 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 ZNF492Q9P255 531 aa11.9□□□□□ -0.5
RPUSD3-215ENST00000475470 P01737 135 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 PSG3Q16557 428 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 COX19Q49B96 90 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 RPP21Q9H633 154 aaKnown RBP11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 NAT8BQ9UHF3 227 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 SMAD5-AS1Q9Y6J3 95 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 PRB4P10163 310 aaPredicted RBP11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 RAB4BP61018 213 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 PSG8Q9UQ74 426 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 ZFP30Q9Y2G7 519 aa11.89□□□□□ -0.51
RPUSD3-215ENST00000475470 C19orf71A6NCJ1 209 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 H3BUA1 57 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 BUB3O43684 328 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 MT-ND6P03923 174 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 IGHV4-31P0DP07 118 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 PPIFP30405 207 aaKnown RBP11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 Q6ZS46 218 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 METTL26Q96S19 204 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 ZMAT5Q9UDW3 170 aaKnown RBP11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 ZNF785A8K8V0 405 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 IGHV4-59P01825 116 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 AMBPP02760 352 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 LURAP1LQ8IV03 231 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 NEU1Q99519 415 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
RPUSD3-215ENST00000475470 CLPSL1A2RUU4 121 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 ARL3P36405 182 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 DEFA6Q01524 100 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 POLQO75417 2590 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 IGHV3-66A0A0C4DH42 116 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 SERTM2A0A1B0GWG4 89 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 HIGD1CA8MV81 97 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 A8MWL6 223 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 ZNF253O75346 499 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 BRI3O95415 125 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 PF4V1P10720 104 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 TMEM136Q6ZRR5 245 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 GBGT1Q8N5D6 347 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 USMG5Q96IX5 58 aa11.87□□□□□ -0.51
RPUSD3-215ENST00000475470 ZNF207O43670 478 aaKnown RBP11.86□□□□□ -0.51
RPUSD3-215ENST00000475470 CT83Q5H943 113 aa11.86□□□□□ -0.51
RPUSD3-215ENST00000475470 C1orf194Q5T5A4 169 aa11.86□□□□□ -0.51
RPUSD3-215ENST00000475470 Q96MF0 132 aa11.86□□□□□ -0.51
RPUSD3-215ENST00000475470 ASCL2Q99929 193 aa11.86□□□□□ -0.51
RPUSD3-215ENST00000475470 CENPEQ02224 2701 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 IGHV3OR16-13A0A075B7E8 117 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 IGHV3-74A0A0B4J1X5 117 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 IGFL4Q6B9Z1 124 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 Q71RC1 249 aaPredicted RBP11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 ARL6IP6Q8N6S5 226 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 ZC2HC1AQ96GY0 325 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 PTPN13Q12923 2485 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 A0A087X0K7 114 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 IGHV3-49A0A0A0MS15 119 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 GRIFINA4D1Z8 144 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 APOHP02749 345 aaPredicted RBP11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 CRISP2P16562 243 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 RASL11AQ6T310 242 aa11.85□□□□□ -0.51
RPUSD3-215ENST00000475470 TCF24Q7RTU0 167 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms