RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 OR51S1Q8NGJ8 323 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 LRRC20Q8TCA0 184 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 SMIM4Q8WVI0 70 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 PRR13Q9NZ81 148 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 RABL2AQ9UBK7 228 aaPredicted RBP8.7□□□□□ -1.02
SKA3-206ENST00000475251 RABL2BQ9UNT1 228 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 A0A087X0K7 114 aa8.69□□□□□ -1.02
SKA3-206ENST00000475251 H3BRN7 92 aa8.69□□□□□ -1.02
SKA3-206ENST00000475251 IFNA5P01569 189 aa8.69□□□□□ -1.02
SKA3-206ENST00000475251 IAPPP10997 89 aa8.69□□□□□ -1.02
SKA3-206ENST00000475251 CXCL3P19876 107 aa8.69□□□□□ -1.02
SKA3-206ENST00000475251 PSG3Q16557 428 aa8.69□□□□□ -1.02
SKA3-206ENST00000475251 SHANK2-AS3Q9BTD1 123 aa8.69□□□□□ -1.02
SKA3-206ENST00000475251 HIGD1AQ9Y241 93 aa8.69□□□□□ -1.02
SKA3-206ENST00000475251 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
SKA3-206ENST00000475251 RGS5O15539 181 aa8.68□□□□□ -1.02
SKA3-206ENST00000475251 GAGE7O76087 117 aa8.68□□□□□ -1.02
SKA3-206ENST00000475251 GAGE12FP0CL80 117 aa8.68□□□□□ -1.02
SKA3-206ENST00000475251 GAGE12GP0CL81 117 aa8.68□□□□□ -1.02
SKA3-206ENST00000475251 GAGE12IP0CL82 117 aa8.68□□□□□ -1.02
SKA3-206ENST00000475251 SLC25A6P12236 298 aa8.68□□□□□ -1.02
SKA3-206ENST00000475251 GATA2P23769 480 aaPredicted RBP8.68□□□□□ -1.02
SKA3-206ENST00000475251 RPUSD4Q96CM3 377 aaKnown RBP8.68□□□□□ -1.02
SKA3-206ENST00000475251 CTDSPLO15194 276 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 SIVA1O15304 175 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 PITX3O75364 302 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 HYPMO75409 117 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 IL5P05113 134 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 CXCL2P19875 107 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 HOXA5P20719 270 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 XGP55808 180 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 Q6ZRN7 208 aaPredicted RBP8.67□□□□□ -1.02
SKA3-206ENST00000475251 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
SKA3-206ENST00000475251 PRSS46E5RG02 174 aa8.66□□□□□ -1.02
SKA3-206ENST00000475251 SYNGR2O43760 224 aa8.66□□□□□ -1.02
SKA3-206ENST00000475251 OR5G3P0C626 314 aa8.66□□□□□ -1.02
SKA3-206ENST00000475251 SELENOTP62341 195 aa8.66□□□□□ -1.02
SKA3-206ENST00000475251 IL18Q14116 193 aa8.66□□□□□ -1.02
SKA3-206ENST00000475251 TMEM182Q6ZP80 229 aaPredicted RBP8.66□□□□□ -1.02
SKA3-206ENST00000475251 CYP2G1PQ6ZSU1 146 aa8.66□□□□□ -1.02
SKA3-206ENST00000475251 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
SKA3-206ENST00000475251 MCUBQ9NWR8 336 aa8.66□□□□□ -1.02
SKA3-206ENST00000475251 A0A096LPF7 62 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 ANKRD20A5PA0PJZ0 165 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 WRBO00258 174 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 PLP1P60201 277 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 LCN15Q6UWW0 184 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 ACOT7LQ6ZUV0 252 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 C18orf15Q96N68 181 aa8.65□□□□□ -1.02
SKA3-206ENST00000475251 STRAPQ9Y3F4 350 aaKnown RBP8.65□□□□□ -1.02
SKA3-206ENST00000475251 TRGV2A0A075B6R0 118 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 FAM229AH3BQW9 127 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 LINC00869P0C866 280 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 ANXA7P20073 488 aaKnown RBP8.64□□□□□ -1.03
SKA3-206ENST00000475251 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
SKA3-206ENST00000475251 ICAM4Q14773 271 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 CTF1Q16619 201 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 TMEM128Q5BJH2 165 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 CCDC190Q86UF4 302 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 LRTM2Q8N967 370 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 PYGO2Q9BRQ0 406 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 MIXL1Q9H2W2 232 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 TMPRSS5Q9H3S3 457 aa8.64□□□□□ -1.03
SKA3-206ENST00000475251 PMS2P5A8MQ11 134 aa8.63□□□□□ -1.03
SKA3-206ENST00000475251 FAUP35544 74 aaKnown RBP8.63□□□□□ -1.03
SKA3-206ENST00000475251 PXDC1Q5TGL8 231 aa8.63□□□□□ -1.03
SKA3-206ENST00000475251 ZNF680Q8NEM1 530 aa8.63□□□□□ -1.03
SKA3-206ENST00000475251 DIRAS2Q96HU8 199 aa8.63□□□□□ -1.03
SKA3-206ENST00000475251 K7EP13 123 aa8.62□□□□□ -1.03
SKA3-206ENST00000475251 VAMP1P23763 118 aa8.62□□□□□ -1.03
SKA3-206ENST00000475251 LEPP41159 167 aa8.62□□□□□ -1.03
SKA3-206ENST00000475251 TMED4Q7Z7H5 227 aa8.62□□□□□ -1.03
SKA3-206ENST00000475251 VSIG2Q96IQ7 327 aa8.62□□□□□ -1.03
SKA3-206ENST00000475251 ODF3Q96PU9 254 aa8.62□□□□□ -1.03
SKA3-206ENST00000475251 ZNF331Q9NQX6 463 aaPredicted RBP8.62□□□□□ -1.03
SKA3-206ENST00000475251 RSL24D1Q9UHA3 163 aaKnown RBP8.62□□□□□ -1.03
SKA3-206ENST00000475251 ICOSQ9Y6W8 199 aa8.62□□□□□ -1.03
SKA3-206ENST00000475251 A0A087WTM6 91 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 H3BP45 60 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 CTDSP2O14595 271 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 NXPH4O95158 308 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 GCSHP23434 173 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 KIR3DS1Q14943 382 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 Q6ZSN1 163 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 Q6ZTI0 123 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 BPIFA4PQ86YQ2 179 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 ARL6Q9H0F7 186 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 ARV1Q9H2C2 271 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 PXMP4Q9Y6I8 212 aa8.61□□□□□ -1.03
SKA3-206ENST00000475251 K7EPK0 472 aa8.6□□□□□ -1.03
SKA3-206ENST00000475251 FUSP35637 526 aaKnown RBP eCLIP8.6□□□□□ -1.03
SKA3-206ENST00000475251 KRTAP10-1P60331 282 aa8.6□□□□□ -1.03
SKA3-206ENST00000475251 SLAQ13239 276 aa8.6□□□□□ -1.03
SKA3-206ENST00000475251 C4orf46Q504U0 113 aa8.6□□□□□ -1.03
SKA3-206ENST00000475251 NAA50Q9GZZ1 169 aaKnown RBP8.6□□□□□ -1.03
SKA3-206ENST00000475251 NPVFQ9HCQ7 196 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms