RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 LYPD6BQ8NI32 183 aa14.42□□□□□ -0.1
PSPC1-203ENST00000471658 SUN5Q8TC36 379 aa14.42□□□□□ -0.1
PSPC1-203ENST00000471658 MS4A6AQ9H2W1 248 aa14.42□□□□□ -0.1
PSPC1-203ENST00000471658 TRBV19A0A075B6N1 114 aa14.41□□□□□ -0.1
PSPC1-203ENST00000471658 A0A087X0K7 114 aa14.41□□□□□ -0.1
PSPC1-203ENST00000471658 NDUFB4O95168 129 aa14.41□□□□□ -0.1
PSPC1-203ENST00000471658 HBE1P02100 147 aa14.41□□□□□ -0.1
PSPC1-203ENST00000471658 NRN1Q9NPD7 142 aa14.41□□□□□ -0.1
PSPC1-203ENST00000471658 PRB4P10163 310 aaPredicted RBP14.41□□□□□ -0.1
PSPC1-203ENST00000471658 UBE2G2P60604 165 aa14.41□□□□□ -0.1
PSPC1-203ENST00000471658 RAB14P61106 215 aa14.41□□□□□ -0.1
PSPC1-203ENST00000471658 MCRIP2Q9BUT9 160 aaKnown RBP14.41□□□□□ -0.1
PSPC1-203ENST00000471658 TSPAN4O14817 238 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 HLA-DMBP28068 263 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 OXLD1Q5BKU9 147 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 CLLU1Q5K131 121 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 PRR31Q5SQ13 230 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 FAM24BQ8N5W8 94 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 DCANP1Q8TF63 244 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 TMEM167BQ9NRX6 74 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 NOTCH3Q9UM47 2321 aa14.4□□□□□ -0.1
PSPC1-203ENST00000471658 TRAV8-2A0A0B4J237 113 aa14.39□□□□□ -0.11
PSPC1-203ENST00000471658 DNASE2O00115 360 aaPredicted RBP14.39□□□□□ -0.11
PSPC1-203ENST00000471658 SOCS3O14543 225 aa14.39□□□□□ -0.11
PSPC1-203ENST00000471658 RANP62826 216 aaKnown RBP14.39□□□□□ -0.11
PSPC1-203ENST00000471658 GUCA2BQ16661 112 aa14.39□□□□□ -0.11
PSPC1-203ENST00000471658 GNG13Q9P2W3 67 aa14.39□□□□□ -0.11
PSPC1-203ENST00000471658 YTHDF2Q9Y5A9 579 aaKnown RBP14.39□□□□□ -0.11
PSPC1-203ENST00000471658 PKD1L1Q8TDX9 2849 aa14.39□□□□□ -0.11
PSPC1-203ENST00000471658 TRAV25A0A0B4J276 109 aa14.38□□□□□ -0.11
PSPC1-203ENST00000471658 CD5P06127 495 aa14.38□□□□□ -0.11
PSPC1-203ENST00000471658 PSMB3P49720 205 aa14.38□□□□□ -0.11
PSPC1-203ENST00000471658 INSL3P51460 131 aa14.38□□□□□ -0.11
PSPC1-203ENST00000471658 EXOC3-AS1Q8N2X6 119 aa14.38□□□□□ -0.11
PSPC1-203ENST00000471658 K7EQG2 157 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 PAGE4O60829 102 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 GUK1Q16774 197 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 RNF182Q8N6D2 247 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 C16orf92Q96LL3 132 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 ZNF331Q9NQX6 463 aaPredicted RBP14.37□□□□□ -0.11
PSPC1-203ENST00000471658 PAFAH1B2P68402 229 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 HAGHQ16775 308 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 OR2K2Q8NGT1 345 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 C20orf173Q96LM9 149 aa14.37□□□□□ -0.11
PSPC1-203ENST00000471658 ZNF256Q9Y2P7 627 aaPredicted RBP14.37□□□□□ -0.11
PSPC1-203ENST00000471658 FAM74A7A6NL05 159 aa14.36□□□□□ -0.11
PSPC1-203ENST00000471658 Q9H3A6 140 aa14.36□□□□□ -0.11
PSPC1-203ENST00000471658 PGPA6NDG6 321 aa14.35□□□□□ -0.11
PSPC1-203ENST00000471658 MEOX2P50222 304 aa14.35□□□□□ -0.11
PSPC1-203ENST00000471658 PDE6HQ13956 83 aa14.35□□□□□ -0.11
PSPC1-203ENST00000471658 ICAM4Q14773 271 aa14.35□□□□□ -0.11
PSPC1-203ENST00000471658 LCN12Q6JVE5 192 aa14.35□□□□□ -0.11
PSPC1-203ENST00000471658 LINC00052Q96N35 136 aa14.35□□□□□ -0.11
PSPC1-203ENST00000471658 SPAG8Q99932 426 aaPredicted RBP14.35□□□□□ -0.11
PSPC1-203ENST00000471658 RARRES2Q99969 163 aa14.35□□□□□ -0.11
PSPC1-203ENST00000471658 GGTLC3B5MD39 225 aa14.34□□□□□ -0.11
PSPC1-203ENST00000471658 M0R3E3 92 aa14.34□□□□□ -0.11
PSPC1-203ENST00000471658 ZNF688P0C7X2 276 aa14.34□□□□□ -0.11
PSPC1-203ENST00000471658 ATP5G3P48201 142 aa14.34□□□□□ -0.11
PSPC1-203ENST00000471658 DEFB1P60022 68 aa14.34□□□□□ -0.11
PSPC1-203ENST00000471658 SUMO1P63165 101 aaKnown RBP14.34□□□□□ -0.11
PSPC1-203ENST00000471658 CST9LP1Q5W188 147 aa14.34□□□□□ -0.11
PSPC1-203ENST00000471658 ZNF705FA8MVS1 300 aaPredicted RBP14.33□□□□□ -0.11
PSPC1-203ENST00000471658 G3V4G9 280 aa14.33□□□□□ -0.11
PSPC1-203ENST00000471658 WIPF1O43516 503 aa14.33□□□□□ -0.11
PSPC1-203ENST00000471658 ZNF253O75346 499 aa14.33□□□□□ -0.11
PSPC1-203ENST00000471658 PSG9Q00887 426 aa14.33□□□□□ -0.11
PSPC1-203ENST00000471658 SLC50A1Q9BRV3 221 aa14.33□□□□□ -0.11
PSPC1-203ENST00000471658 A0A1W2PRE2 83 aa14.33□□□□□ -0.12
PSPC1-203ENST00000471658 ISLRO14498 428 aa14.33□□□□□ -0.12
PSPC1-203ENST00000471658 PMS2P11Q13670 270 aa14.33□□□□□ -0.12
PSPC1-203ENST00000471658 BEAN1Q3B7T3 259 aa14.33□□□□□ -0.12
PSPC1-203ENST00000471658 OTORQ9NRC9 128 aa14.33□□□□□ -0.12
PSPC1-203ENST00000471658 TRAV2A0A0B4J234 112 aa14.32□□□□□ -0.12
PSPC1-203ENST00000471658 RBFOX3A6NFN3 312 aa14.32□□□□□ -0.12
PSPC1-203ENST00000471658 OR4C46A6NHA9 309 aa14.32□□□□□ -0.12
PSPC1-203ENST00000471658 BCL2P10415 239 aa14.32□□□□□ -0.12
PSPC1-203ENST00000471658 PPT1P50897 306 aa14.32□□□□□ -0.12
PSPC1-203ENST00000471658 MANBALQ9NQG1 85 aa14.32□□□□□ -0.12
PSPC1-203ENST00000471658 LOC102723971A0A1B0GUV8 181 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 PRAC2D3DTV9 90 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 CD7P09564 240 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 ID1P41134 155 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 GNG5P63218 68 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 SRSF3P84103 164 aaKnown RBP14.31□□□□□ -0.12
PSPC1-203ENST00000471658 PSG3Q16557 428 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 PSMG4Q5JS54 123 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 TOR2AQ5JU69 321 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 LYPD1Q8N2G4 141 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 RXFP4Q8TDU9 374 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 FAM210AQ96ND0 272 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 AAMDCQ9H7C9 122 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 SORL1Q92673 2214 aa14.31□□□□□ -0.12
PSPC1-203ENST00000471658 IFNA1P01562 189 aa14.3□□□□□ -0.12
PSPC1-203ENST00000471658 KRTAP10-11P60412 298 aa14.3□□□□□ -0.12
PSPC1-203ENST00000471658 CCDC28AQ8IWP9 274 aa14.3□□□□□ -0.12
PSPC1-203ENST00000471658 RPH3ALQ9UNE2 315 aa14.3□□□□□ -0.12
PSPC1-203ENST00000471658 C11orf94C9JXX5 98 aa14.3□□□□□ -0.12
PSPC1-203ENST00000471658 SLC25A5P05141 298 aaKnown RBP14.3□□□□□ -0.12
PSPC1-203ENST00000471658 DEFB131AP59861 70 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms