RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 BPIFCQ8NFQ6 507 aa6.22□□□□□ -1.41
CCDC171-204ENST00000470191 OR1S1Q8NH92 325 aa6.22□□□□□ -1.41
CCDC171-204ENST00000470191 VSIG2Q96IQ7 327 aa6.22□□□□□ -1.41
CCDC171-204ENST00000470191 HSPB7Q9UBY9 170 aa6.22□□□□□ -1.41
CCDC171-204ENST00000470191 CRYM-AS1A6NIL9 109 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 H7BYZ3 331 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 CDKN1BP46527 198 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 RAB11AP62491 216 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 SMCO1Q147U7 214 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 PSG3Q16557 428 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 STEAP1BQ6NZ63 245 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 LYZL2Q7Z4W2 148 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 THAP8Q8NA92 274 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 TMEM229BQ8NBD8 167 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 GPR82Q96P67 336 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 MTFP1Q9UDX5 166 aa6.21□□□□□ -1.42
CCDC171-204ENST00000470191 TRGV2A0A075B6R0 118 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 TRAV12-3A0A0B4J271 114 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 H3BNG1 76 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 IGHV3-53P01767 116 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 CXCL3P19876 107 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 TBPP20226 339 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 CCR6P51684 374 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 TAS2R19P59542 299 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 VBP1P61758 197 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 NCS1P62166 190 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 AKR1C1Q04828 323 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 NFE4Q86UQ8 179 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 OR4D5Q8NGN0 318 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 IL22RA2Q969J5 263 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 RPUSD4Q96CM3 377 aaKnown RBP6.2□□□□□ -1.42
CCDC171-204ENST00000470191 Q9H521 79 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 EXTL2Q9UBQ6 330 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 TMEM56-RWDD3S4R434 201 aa6.2□□□□□ -1.42
CCDC171-204ENST00000470191 IGLV5-52A0A0A0MRZ9 124 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 SMCO3A2RU48 225 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 DISC1C4P0D8 188 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 H3BRN7 92 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 H3BTX0 84 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 CFDP00746 253 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-204ENST00000470191 OR5G3P0C626 314 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 AKR1C4P17516 323 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 RAP2BP61225 183 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 GFI1BQ5VTD9 330 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 SYT8Q8NBV8 401 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 YIPF6Q96EC8 236 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 CACFD1Q9UGQ2 172 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 SLC45A2Q9UMX9 530 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 GPR132Q9UNW8 380 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 HIGD1AQ9Y241 93 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 KCNIP3Q9Y2W7 256 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 ICOSQ9Y6W8 199 aa6.19□□□□□ -1.42
CCDC171-204ENST00000470191 TRGV1A0A0A0MS02 117 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 NPIPB6E9PJ23 425 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 WRBO00258 174 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 RPL7P18124 248 aaKnown RBP6.18□□□□□ -1.42
CCDC171-204ENST00000470191 ANXA7P20073 488 aaKnown RBP6.18□□□□□ -1.42
CCDC171-204ENST00000470191 MZT2AQ6P582 158 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 SHANK2-AS3Q9BTD1 123 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 MSRB1Q9NZV6 116 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 FUT9Q9Y231 359 aa6.18□□□□□ -1.42
CCDC171-204ENST00000470191 TRAV9-2A0A087WT02 112 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
CCDC171-204ENST00000470191 PRAC2D3DTV9 90 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 H3BP45 60 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 PSCAO43653 123 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 IL5P05113 134 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 S100A7P31151 101 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 ATP5IP56385 69 aaPredicted RBP6.17□□□□□ -1.42
CCDC171-204ENST00000470191 SERTAD4-AS1Q5TG53 156 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 WFDC10BQ8IUB3 73 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 OR51S1Q8NGJ8 323 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 C20orf144Q9BQM9 153 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 TMEM70Q9BUB7 260 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 LY96Q9Y6Y9 160 aa6.17□□□□□ -1.42
CCDC171-204ENST00000470191 A0A0B4J2A0 478 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 LINC00854A0A1B0GVQ3 168 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 PMS2P5A8MQ11 134 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 PRAF2O60831 178 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 HYPMO75409 117 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
CCDC171-204ENST00000470191 LINC00869P0C866 280 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 SURF2Q15527 256 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-204ENST00000470191 SPANXN5Q5MJ07 72 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 LYPD5Q6UWN5 251 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 CLVS1Q8IUQ0 354 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-204ENST00000470191 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 ARL6Q9H0F7 186 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 SHPKQ9UHJ6 478 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 KLF12Q9Y4X4 402 aa6.16□□□□□ -1.42
CCDC171-204ENST00000470191 A0A087X0K7 114 aa6.15□□□□□ -1.42
CCDC171-204ENST00000470191 PRSS46E5RG02 174 aa6.15□□□□□ -1.42
CCDC171-204ENST00000470191 ZNF324O75467 553 aaPredicted RBP6.15□□□□□ -1.42
CCDC171-204ENST00000470191 AKAIN1P0CW23 69 aa6.15□□□□□ -1.42
CCDC171-204ENST00000470191 EVI2AP22794 236 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms