RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 FAM212BQ9NTI7 297 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-209ENST00000469511 NDUFB11Q9NX14 153 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 ZNF98A6NK75 572 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 PRSS47A8MTI9 375 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 PRAC2D3DTV9 90 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 LECT2O14960 151 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 GSTZ1O43708 216 aaPredicted RBP3.47□□□□□ -1.85
PTPN4-209ENST00000469511 PRAF2O60831 178 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 DUSP14O95147 198 aaKnown RBP3.47□□□□□ -1.85
PTPN4-209ENST00000469511 GAS8-AS1O95177 125 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 RLN2P04090 185 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 OR5AC1P0C628 307 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 SLC25A4P12235 298 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 SDC2P34741 201 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 RANBP1P43487 201 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 AKR1C2P52895 323 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 B2MP61769 119 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 RHOBP62745 196 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 GAMTQ14353 236 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 TWIST1Q15672 202 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 PXDC1Q5TGL8 231 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 PACRGLQ8N7B6 248 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 SLC24A4Q8NFF2 622 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 OR8A1Q8NGG7 326 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 CIRBP-AS1Q8TBR5 109 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 BORCS5Q969J3 196 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 RPL36ALQ969Q0 106 aaKnown RBP3.47□□□□□ -1.85
PTPN4-209ENST00000469511 LINC00467Q9BRT7 94 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 ENY2Q9NPA8 101 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 IFT46Q9NQC8 304 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 SCN3BQ9NY72 215 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 LY96Q9Y6Y9 160 aa3.47□□□□□ -1.85
PTPN4-209ENST00000469511 FAT4Q6V0I7 4981 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-209ENST00000469511 IGLV5-39A0A0G2JS06 123 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 ZFP92A6NM28 416 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 ZNF324O75467 553 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-209ENST00000469511 SCGNO76038 276 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 C1QBP02746 253 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 PGAM2P15259 253 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 PSMB9P28065 219 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 TGFBR1P36897 503 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 CBX5P45973 191 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 SPCS3P61009 180 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 KLF9Q13886 244 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-209ENST00000469511 AARDQ4LEZ3 155 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 NMSQ5H8A3 153 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 C1orf194Q5T5A4 169 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 GFI1BQ5VTD9 330 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 OR8G2PQ6IF36 304 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 Q6ZQT7 251 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 ZNF493Q6ZR52 646 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 PRSS48Q7RTY5 328 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 TMEM256Q8N2U0 113 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 C11orf72Q8NBR9 251 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 ZNF738Q8NE65 137 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 RNASEH2CQ8TDP1 164 aaKnown RBP3.46□□□□□ -1.86
PTPN4-209ENST00000469511 PPP1R14BQ96C90 147 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 PDCD10Q9BUL8 212 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 GSN-AS1Q9NRJ2 163 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 CACNG5Q9UF02 275 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 TPRKBQ9Y3C4 175 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 KLF12Q9Y4X4 402 aa3.46□□□□□ -1.86
PTPN4-209ENST00000469511 LPAP08519 4548 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 TRGV1A0A0A0MS02 117 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 LOC100131303A0A0U1RQF7 123 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 C3orf85A0A1B0GTC6 90 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 LINC00854A0A1B0GVQ3 168 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 ERICH4A6NGS2 130 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 CEBPZOSA8MTT3 80 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 SNURFLB1AK76 121 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 PSCAO43653 123 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 SCGB2A1O75556 95 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 CRYGDP07320 174 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 ZNF182P17025 639 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-209ENST00000469511 CXCL3P19876 107 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 CDKN1BP46527 198 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 CRYBA4P53673 196 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 PIGPP57054 158 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 RND3P61587 244 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 TSPAN5P62079 268 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 TRIM16LQ309B1 348 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 SELENOHQ8IZQ5 122 aaKnown RBP3.45□□□□□ -1.86
PTPN4-209ENST00000469511 ZBTB8BQ8NAP8 495 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-209ENST00000469511 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 Q9HAA7 133 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 DIABLOQ9NR28 239 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 FUT9Q9Y231 359 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 ICOSQ9Y6W8 199 aa3.45□□□□□ -1.86
PTPN4-209ENST00000469511 TRGV2A0A075B6R0 118 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 TRAV9-2A0A087WT02 112 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 A0A0A6YYH2 397 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 TRAV12-3A0A0B4J271 114 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 A6NJ64 397 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 SNRPGP15A8MWD9 76 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 E5RGE8 158 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 H3BTX0 84 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 H7BYZ3 331 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 NDUFB4O95168 129 aa3.44□□□□□ -1.86
PTPN4-209ENST00000469511 SFTA3P0C7M3 94 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms