RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CSN3P07498 182 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 MYOD1P15172 320 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 GATA3P23771 443 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 PPIFP30405 207 aaKnown RBP3.88□□□□□ -1.79
SF3B1-207ENST00000468925 CCL11P51671 97 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 ATP5J2P56134 94 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 DLX6P56179 175 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 HSPE1P61604 102 aaKnown RBP3.88□□□□□ -1.79
SF3B1-207ENST00000468925 CACNG7P62955 275 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 UBE2L3P68036 154 aaKnown RBP3.88□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM30BQ3MIR4 351 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.88□□□□□ -1.79
SF3B1-207ENST00000468925 ZNF329Q86UD4 541 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 CIARTQ8N365 385 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-207ENST00000468925 OR8A1Q8NGG7 326 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 OR13A1Q8NGR1 328 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 OR1L8Q8NGR8 309 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 IL17DQ8TAD2 202 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 DDB2Q92466 427 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 ZNF524Q96C55 264 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM101Q96IK0 257 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 DUX5Q96PT3 197 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 PRADC1Q9BSG0 188 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 PAXXQ9BUH6 204 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM74BQ9NUR3 256 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 KLRF1Q9NZS2 232 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 PRNDQ9UKY0 176 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 EPDR1Q9UM22 224 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 FOXA2Q9Y261 457 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-207ENST00000468925 TRAV8-4A0A0B4J246 113 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 TRAV24A0A0B4J272 114 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 C9JAW5 83 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 CCDC179H3BU77 68 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 J3QT63 122 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 CEACAM4O75871 244 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 NDUFA7O95182 113 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 NCR2O95944 276 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 MT-CO3P00414 261 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 CYBAP13498 195 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 COL8A2P25067 703 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 FCER1GP30273 86 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 MYCNOSP40205 109 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 EMP1P54849 157 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 PLGLAQ15195 96 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 IZUMO4Q1ZYL8 232 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 C2orf83Q53S99 150 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 SPRNQ5BIV9 151 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 PAPPA-AS1Q5QFB9 102 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 FAM159AQ6UWV7 190 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 Q71RC1 249 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-207ENST00000468925 MIR17HGQ75NE6 70 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 LYPD1Q8N2G4 141 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 ABHD12Q8N2K0 398 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 C15orf53Q8NAA6 179 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 RASL10AQ92737 203 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 LINC00526Q96FQ7 95 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 TRGV9Q99603 122 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 DEPPQ9NTK1 212 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 RNF186Q9NXI6 227 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 C11orf21Q9P2W6 132 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 TP73-AS1Q9UF72 201 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 FZR1Q9UM11 496 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 HIGD1AQ9Y241 93 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 ARHGAP21Q5T5U3 1957 aa3.87□□□□□ -1.79
SF3B1-207ENST00000468925 MYOFQ9NZM1 2061 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 TRBV7-3A0A075B6L6 115 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 TRAV8-2A0A0B4J237 113 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 TRAV12-1A0A0B4J245 112 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 C15orf61A6NNL5 157 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 NPFFO15130 113 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 SPINT2O43291 252 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 COX7A2P2O60397 106 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 CRLF1O75462 422 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 RBP4P02753 201 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 P0DMU3 169 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 FAM231AP0DMU4 169 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 FAM231CP0DMU5 169 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 VPREB1P12018 145 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 PRTN3P24158 256 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 HLA-DMBP28068 263 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 CFHR2P36980 270 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 CXCL5P42830 114 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 UBE2D1P51668 147 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 DSCR4P56555 118 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-207ENST00000468925 ZNF816Q0VGE8 651 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-207ENST00000468925 DAZAP2Q15038 168 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM170BQ5T4T1 132 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 NFE4Q86UQ8 179 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 PCP2Q8IVA1 136 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 C3orf22Q8N5N4 141 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 SLC37A2Q8TED4 501 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 SSMEM1Q8WWF3 244 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 PGLYRP4Q96LB8 373 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 NAA38Q9BRA0 125 aaKnown RBP3.86□□□□□ -1.79
SF3B1-207ENST00000468925 OR2H1Q9GZK4 316 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 PROCRQ9UNN8 238 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 HHLA3Q9XRX5 114 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 WNT6Q9Y6F9 365 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 MUC22E2RYF6 1773 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms