RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 BUB3O43684 328 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 FSHBP01225 129 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 HLA-DQA1P01909 254 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 MGST1P10620 155 aaKnown RBP5.91□□□□□ -1.46
COL6A3-208ENST00000468792 ESDP10768 282 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 HNF1AP20823 631 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 Q0VG73 95 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 ECSCRQ19T08 205 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 TOMM20LQ6UXN7 152 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 Q86TA4 180 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 OR8I2Q8N0Y5 310 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 OR5R1Q8NH85 324 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 CCDC140Q96MF4 163 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 PRDM13Q9H4Q3 707 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 AAMDCQ9H7C9 122 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 NAT8BQ9UHF3 227 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 USP9YO00507 2555 aaPredicted RBP5.91□□□□□ -1.46
COL6A3-208ENST00000468792 ANKRD17O75179 2603 aaKnown RBP5.9□□□□□ -1.46
COL6A3-208ENST00000468792 TRAV34A0A0B4J273 112 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 A0A0G2JLM5 398 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 XKRY2A2RUG3 117 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 LINC01548A6NM66 108 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 G3V318 75 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 H3BUX3 64 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 IGLV1-40P01703 118 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 GPR183P32249 361 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 CSN1S1P47710 185 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 GNG5P63218 68 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 CFHR3Q02985 330 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 PSG3Q16557 428 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 DEFB113Q30KQ7 82 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 SAPCD1Q5SSQ6 148 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 BRD3OSQ6XYD6 125 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 MRPL53Q96EL3 112 aaKnown RBP5.9□□□□□ -1.46
COL6A3-208ENST00000468792 SLC50A1Q9BRV3 221 aa5.9□□□□□ -1.46
COL6A3-208ENST00000468792 RPP21Q9H633 154 aaKnown RBP5.9□□□□□ -1.46
COL6A3-208ENST00000468792 PTPN13Q12923 2485 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.89□□□□□ -1.47
COL6A3-208ENST00000468792 CLPSL1A2RUU4 121 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 RBAKDNA6NC62 111 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 NDUFA4O00483 81 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 P01737 135 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 CD33P20138 364 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 SRSF2Q01130 221 aaKnown RBP5.89□□□□□ -1.47
COL6A3-208ENST00000468792 OR10J3Q5JRS4 329 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 Q6AWC8 147 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 TMEM136Q6ZRR5 245 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 GOLT1AQ6ZVE7 132 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 TMEM219Q86XT9 240 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 EXOC3-AS1Q8N2X6 119 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 TEX29Q8N6K0 151 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 NUP35Q8NFH5 326 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 DAZAP1Q96EP5 407 aaKnown RBP5.89□□□□□ -1.47
COL6A3-208ENST00000468792 METTL26Q96S19 204 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 HIST1H2BLQ99880 126 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 GPR61Q9BZJ8 451 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 MRPL18Q9H0U6 180 aaKnown RBP5.89□□□□□ -1.47
COL6A3-208ENST00000468792 ZNF331Q9NQX6 463 aaPredicted RBP5.89□□□□□ -1.47
COL6A3-208ENST00000468792 SERTAD4Q9NUC0 356 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 PPP1R14DQ9NXH3 145 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 PSG8Q9UQ74 426 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 SMAD5-AS1Q9Y6J3 95 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 CELSR1Q9NYQ6 3014 aa5.89□□□□□ -1.47
COL6A3-208ENST00000468792 NAV2Q8IVL1 2488 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 A0A1B0GW15 77 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 A0A1B0GXF2 115 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 SNURFLB1AK76 121 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 TRGV3P03979 118 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 IER3P46695 156 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 PAFAH1B2P68402 229 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 GFI1BQ5VTD9 330 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 CYB5R2Q6BCY4 276 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 CLEC19AQ6UXS0 136 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 RBPMS2Q6ZRY4 209 aaKnown RBP5.88□□□□□ -1.47
COL6A3-208ENST00000468792 BCL6BQ8N143 479 aaPredicted RBP5.88□□□□□ -1.47
COL6A3-208ENST00000468792 CIARTQ8N365 385 aaPredicted RBP5.88□□□□□ -1.47
COL6A3-208ENST00000468792 GATD1Q8NB37 220 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 TMEM18Q96B42 140 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 C17orf77Q96MU5 243 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 NEU1Q99519 415 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 S4R3C0 116 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 PRRC2AP48634 2157 aaKnown RBP5.88□□□□□ -1.47
COL6A3-208ENST00000468792 APCP25054 2843 aa5.88□□□□□ -1.47
COL6A3-208ENST00000468792 KMT2BQ9UMN6 2715 aaPredicted RBP5.87□□□□□ -1.47
COL6A3-208ENST00000468792 CSMD1Q96PZ7 3565 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 IGHV3OR16-10A0A075B7F0 116 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 ZNF785A8K8V0 405 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 HIGD1CA8MV81 97 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 A8MWP6 167 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 IGHV3-23P01764 117 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 IGHG4P01861 327 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 AMBPP02760 352 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 IGHV4-31P0DP07 118 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 CRISP2P16562 243 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 CBLN1P23435 193 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 COL8A1P27658 744 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 JOSD1Q15040 202 aaPredicted RBP5.87□□□□□ -1.47
COL6A3-208ENST00000468792 LINC00322Q6ZN03 302 aaPredicted RBP5.87□□□□□ -1.47
COL6A3-208ENST00000468792 GBGT1Q8N5D6 347 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 NHLRC2Q8NBF2 726 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms