RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 HIGD1AQ9Y241 93 aa13.12□□□□□ -0.31
SRSF4-202ENST00000466448 STRAPQ9Y3F4 350 aaKnown RBP13.12□□□□□ -0.31
SRSF4-202ENST00000466448 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
SRSF4-202ENST00000466448 SMCO3A2RU48 225 aa13.11□□□□□ -0.31
SRSF4-202ENST00000466448 SFT2D2O95562 160 aa13.11□□□□□ -0.31
SRSF4-202ENST00000466448 CLINT1Q14677 625 aa13.11□□□□□ -0.31
SRSF4-202ENST00000466448 BAK1Q16611 211 aa13.11□□□□□ -0.31
SRSF4-202ENST00000466448 A0A087X0K7 114 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 CENPXA8MT69 81 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 HYPMO75409 117 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 LINC00869P0C866 280 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 PSG3Q16557 428 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 LINC00299Q6ZSB3 139 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 SPATA12Q7Z6I5 190 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 Q8N1X5 172 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 RNASE8Q8TDE3 154 aaKnown RBP13.1□□□□□ -0.31
SRSF4-202ENST00000466448 KRTAP1-5Q9BYS1 174 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 Q9H8V8 135 aa13.1□□□□□ -0.31
SRSF4-202ENST00000466448 NOP10Q9NPE3 64 aaKnown RBP13.1□□□□□ -0.31
SRSF4-202ENST00000466448 APOBP04114 4563 aaKnown RBP13.09□□□□□ -0.31
SRSF4-202ENST00000466448 OR5G3P0C626 314 aa13.09□□□□□ -0.31
SRSF4-202ENST00000466448 PLP1P60201 277 aa13.09□□□□□ -0.31
SRSF4-202ENST00000466448 DNAH5Q8TE73 4624 aa13.08□□□□□ -0.31
SRSF4-202ENST00000466448 CDKN1BP46527 198 aa13.08□□□□□ -0.32
SRSF4-202ENST00000466448 ZNF493Q6ZR52 646 aa13.08□□□□□ -0.32
SRSF4-202ENST00000466448 LRRC20Q8TCA0 184 aa13.08□□□□□ -0.32
SRSF4-202ENST00000466448 TMEM263Q8WUH6 116 aaKnown RBP13.08□□□□□ -0.32
SRSF4-202ENST00000466448 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.32
SRSF4-202ENST00000466448 SDHCQ99643 169 aaPredicted RBP13.08□□□□□ -0.32
SRSF4-202ENST00000466448 TRAV26-1A0A087WT03 109 aa13.07□□□□□ -0.32
SRSF4-202ENST00000466448 A6NHS1 94 aa13.07□□□□□ -0.32
SRSF4-202ENST00000466448 PMS2P5A8MQ11 134 aa13.07□□□□□ -0.32
SRSF4-202ENST00000466448 IL7P13232 177 aa13.07□□□□□ -0.32
SRSF4-202ENST00000466448 UBE2MP61081 183 aaKnown RBP13.07□□□□□ -0.32
SRSF4-202ENST00000466448 SELENOTP62341 195 aa13.07□□□□□ -0.32
SRSF4-202ENST00000466448 POLR2GP62487 172 aaKnown RBP eCLIP13.07□□□□□ -0.32
SRSF4-202ENST00000466448 ID3Q02535 119 aa13.07□□□□□ -0.32
SRSF4-202ENST00000466448 OR5I1Q13606 314 aa13.07□□□□□ -0.32
SRSF4-202ENST00000466448 PATE2Q6UY27 113 aa13.07□□□□□ -0.32
SRSF4-202ENST00000466448 GNPNAT1Q96EK6 184 aaPredicted RBP13.07□□□□□ -0.32
SRSF4-202ENST00000466448 H7BYZ3 331 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 MRPS12O15235 138 aaKnown RBP13.06□□□□□ -0.32
SRSF4-202ENST00000466448 ADAP1O75689 374 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 NDUFB6O95139 128 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 TTC32Q5I0X7 151 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 Q9H3A6 140 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 SCRT2Q9NQ03 307 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 PSENENQ9NZ42 101 aa13.06□□□□□ -0.32
SRSF4-202ENST00000466448 LINC00854A0A1B0GVQ3 168 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 CCNKO75909 580 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 M6PRP20645 277 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 HOXA5P20719 270 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 KRTAP10-2P60368 255 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 RRAS2P62070 204 aaPredicted RBP13.05□□□□□ -0.32
SRSF4-202ENST00000466448 CNPY1Q3B7I2 92 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 LINC00612Q8N6U2 182 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 OR10J6PQ8NGY7 276 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 S100ZQ8WXG8 99 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 ZNF503Q96F45 646 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
SRSF4-202ENST00000466448 A0A0J9YY99 117 aa13.04□□□□□ -0.32
SRSF4-202ENST00000466448 K7EPK0 472 aa13.04□□□□□ -0.32
SRSF4-202ENST00000466448 SSSCA1O60232 199 aa13.04□□□□□ -0.32
SRSF4-202ENST00000466448 SNRPCP09234 159 aaKnown RBP13.04□□□□□ -0.32
SRSF4-202ENST00000466448 ANXA7P20073 488 aaKnown RBP13.04□□□□□ -0.32
SRSF4-202ENST00000466448 S100A7AQ86SG5 101 aa13.04□□□□□ -0.32
SRSF4-202ENST00000466448 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
SRSF4-202ENST00000466448 C20orf144Q9BQM9 153 aa13.04□□□□□ -0.32
SRSF4-202ENST00000466448 CCDC32Q9BV29 185 aa13.04□□□□□ -0.32
SRSF4-202ENST00000466448 PARD6GQ9BYG4 376 aaPredicted RBP13.04□□□□□ -0.32
SRSF4-202ENST00000466448 ZNF331Q9NQX6 463 aaPredicted RBP13.04□□□□□ -0.32
SRSF4-202ENST00000466448 CXCL2P19875 107 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 DLK1P80370 383 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 SLC38A11Q08AI6 406 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 ESRGQ1W209 222 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 GFI1BQ5VTD9 330 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 LCN15Q6UWW0 184 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 UPK3BQ9BT76 320 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 NPVFQ9HCQ7 196 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
SRSF4-202ENST00000466448 GAGE12BA1L429 117 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 C9orf170A2RU37 121 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 PRAC2D3DTV9 90 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 GAGE7O76087 117 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 METTL15P1P0C7V9 234 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 GAGE12FP0CL80 117 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 GAGE12GP0CL81 117 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 GAGE12IP0CL82 117 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 TEPPQ6URK8 271 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 TMEM14EPQ6UXP3 125 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 SMIM8Q96KF7 97 aa13.02□□□□□ -0.33
SRSF4-202ENST00000466448 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
SRSF4-202ENST00000466448 FNDC10F2Z333 226 aa13.01□□□□□ -0.33
SRSF4-202ENST00000466448 SLC17A3O00476 420 aa13.01□□□□□ -0.33
SRSF4-202ENST00000466448 RLN2P04090 185 aa13.01□□□□□ -0.33
SRSF4-202ENST00000466448 BTF3P20290 206 aaKnown RBP13.01□□□□□ -0.33
SRSF4-202ENST00000466448 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
SRSF4-202ENST00000466448 CCDC28AQ8IWP9 274 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms