RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RPUSD4Q96CM3 377 aaKnown RBP9.91□□□□□ -0.82
SMC1A-204ENST00000463684 SCGB3A2Q96PL1 93 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 SHANK2-AS3Q9BTD1 123 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 FUNDC2Q9BWH2 189 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 HIGD1AQ9Y241 93 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 SRRM2Q9UQ35 2752 aaKnown RBP9.91□□□□□ -0.82
SMC1A-204ENST00000463684 VPS13BQ7Z7G8 4022 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 A0A087WTM6 91 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 A0A087WXM4 84 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 PIGBOS1A0A0B4J2F0 54 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 MED6O75586 246 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 ATP6V1G2O95670 118 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 GCSHP23434 173 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 MRPS10P82664 201 aaKnown RBP9.9□□□□□ -0.82
SMC1A-204ENST00000463684 Q6ZSN1 163 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 S100A7AQ86SG5 101 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 OR51S1Q8NGJ8 323 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 CIB3Q96Q77 187 aaPredicted RBP9.9□□□□□ -0.82
SMC1A-204ENST00000463684 TMPRSS5Q9H3S3 457 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 TNFRSF18Q9Y5U5 241 aa9.9□□□□□ -0.82
SMC1A-204ENST00000463684 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
SMC1A-204ENST00000463684 HYPMO75409 117 aa9.89□□□□□ -0.83
SMC1A-204ENST00000463684 NXPH4O95158 308 aa9.89□□□□□ -0.83
SMC1A-204ENST00000463684 IL5P05113 134 aa9.89□□□□□ -0.83
SMC1A-204ENST00000463684 DNAH10OSP0CZ25 163 aa9.89□□□□□ -0.83
SMC1A-204ENST00000463684 PRB4P10163 310 aaPredicted RBP9.89□□□□□ -0.83
SMC1A-204ENST00000463684 TMED4Q7Z7H5 227 aa9.89□□□□□ -0.83
SMC1A-204ENST00000463684 CLVS1Q8IUQ0 354 aaPredicted RBP9.89□□□□□ -0.83
SMC1A-204ENST00000463684 VSIG2Q96IQ7 327 aa9.89□□□□□ -0.83
SMC1A-204ENST00000463684 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
SMC1A-204ENST00000463684 A0A087X0K7 114 aa9.88□□□□□ -0.83
SMC1A-204ENST00000463684 PITX3O75364 302 aa9.88□□□□□ -0.83
SMC1A-204ENST00000463684 OR5G3P0C626 314 aa9.88□□□□□ -0.83
SMC1A-204ENST00000463684 ANXA7P20073 488 aaKnown RBP9.88□□□□□ -0.83
SMC1A-204ENST00000463684 DAZ2Q13117 558 aaKnown RBP9.88□□□□□ -0.83
SMC1A-204ENST00000463684 KIR3DS1Q14943 382 aa9.88□□□□□ -0.83
SMC1A-204ENST00000463684 CCDC190Q86UF4 302 aa9.88□□□□□ -0.83
SMC1A-204ENST00000463684 SCP2D1Q9UJQ7 156 aa9.88□□□□□ -0.83
SMC1A-204ENST00000463684 RNF24Q9Y225 148 aa9.88□□□□□ -0.83
SMC1A-204ENST00000463684 PRSS46E5RG02 174 aa9.87□□□□□ -0.83
SMC1A-204ENST00000463684 WRBO00258 174 aa9.87□□□□□ -0.83
SMC1A-204ENST00000463684 GFI1BQ5VTD9 330 aa9.87□□□□□ -0.83
SMC1A-204ENST00000463684 CYP2G1PQ6ZSU1 146 aa9.87□□□□□ -0.83
SMC1A-204ENST00000463684 Q6ZTI0 123 aa9.87□□□□□ -0.83
SMC1A-204ENST00000463684 DUXBA0A1W2PPF3 345 aa9.86□□□□□ -0.83
SMC1A-204ENST00000463684 SMCO3A2RU48 225 aa9.86□□□□□ -0.83
SMC1A-204ENST00000463684 RGS5O15539 181 aa9.86□□□□□ -0.83
SMC1A-204ENST00000463684 SYNGR2O43760 224 aa9.86□□□□□ -0.83
SMC1A-204ENST00000463684 SPANXN5Q5MJ07 72 aa9.86□□□□□ -0.83
SMC1A-204ENST00000463684 SMIM4Q8WVI0 70 aa9.86□□□□□ -0.83
SMC1A-204ENST00000463684 PARD6GQ9BYG4 376 aaPredicted RBP9.86□□□□□ -0.83
SMC1A-204ENST00000463684 ICOSQ9Y6W8 199 aa9.86□□□□□ -0.83
SMC1A-204ENST00000463684 FLG2Q5D862 2391 aaPredicted RBP9.86□□□□□ -0.83
SMC1A-204ENST00000463684 TRAV12-3A0A0B4J271 114 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 PMS2P5A8MQ11 134 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 J3KRW8 73 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 PAX4O43316 350 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 LINC00869P0C866 280 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 SLC25A6P12236 298 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 CXCL2P19875 107 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 PLP1P60201 277 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 SELENOTP62341 195 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 LCN15Q6UWW0 184 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 ACOT7LQ6ZUV0 252 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 PYGO2Q9BRQ0 406 aa9.85□□□□□ -0.83
SMC1A-204ENST00000463684 STRAPQ9Y3F4 350 aaKnown RBP9.85□□□□□ -0.83
SMC1A-204ENST00000463684 LEPP41159 167 aa9.84□□□□□ -0.83
SMC1A-204ENST00000463684 HAMPP81172 84 aa9.84□□□□□ -0.83
SMC1A-204ENST00000463684 SLC50A1Q9BRV3 221 aa9.84□□□□□ -0.83
SMC1A-204ENST00000463684 ZNF331Q9NQX6 463 aaPredicted RBP9.84□□□□□ -0.83
SMC1A-204ENST00000463684 MCUBQ9NWR8 336 aa9.84□□□□□ -0.83
SMC1A-204ENST00000463684 FUT9Q9Y231 359 aa9.84□□□□□ -0.83
SMC1A-204ENST00000463684 LY96Q9Y6Y9 160 aa9.84□□□□□ -0.83
SMC1A-204ENST00000463684 TRGV1A0A0A0MS02 117 aa9.83□□□□□ -0.84
SMC1A-204ENST00000463684 ANKRD20A5PA0PJZ0 165 aa9.83□□□□□ -0.84
SMC1A-204ENST00000463684 ZNF324O75467 553 aaPredicted RBP9.83□□□□□ -0.84
SMC1A-204ENST00000463684 IL18Q14116 193 aa9.83□□□□□ -0.84
SMC1A-204ENST00000463684 TMEM70Q9BUB7 260 aa9.83□□□□□ -0.84
SMC1A-204ENST00000463684 ARL6Q9H0F7 186 aa9.83□□□□□ -0.84
SMC1A-204ENST00000463684 MIXL1Q9H2W2 232 aa9.83□□□□□ -0.84
SMC1A-204ENST00000463684 GSN-AS1Q9NRJ2 163 aa9.83□□□□□ -0.84
SMC1A-204ENST00000463684 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
SMC1A-204ENST00000463684 NPIPB6E9PJ23 425 aa9.82□□□□□ -0.84
SMC1A-204ENST00000463684 H3BP45 60 aa9.82□□□□□ -0.84
SMC1A-204ENST00000463684 K7EP13 123 aa9.82□□□□□ -0.84
SMC1A-204ENST00000463684 CTDSPLO15194 276 aa9.82□□□□□ -0.84
SMC1A-204ENST00000463684 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
SMC1A-204ENST00000463684 ZNF680Q8NEM1 530 aa9.82□□□□□ -0.84
SMC1A-204ENST00000463684 ZNF431Q8TF32 576 aaPredicted RBP9.82□□□□□ -0.84
SMC1A-204ENST00000463684 ARV1Q9H2C2 271 aa9.82□□□□□ -0.84
SMC1A-204ENST00000463684 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
SMC1A-204ENST00000463684 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
SMC1A-204ENST00000463684 MRPS12O15235 138 aaKnown RBP9.81□□□□□ -0.84
SMC1A-204ENST00000463684 SNRPCP09234 159 aaKnown RBP9.81□□□□□ -0.84
SMC1A-204ENST00000463684 EVI2AP22794 236 aa9.81□□□□□ -0.84
SMC1A-204ENST00000463684 SLAQ13239 276 aa9.81□□□□□ -0.84
SMC1A-204ENST00000463684 MRPL23Q16540 153 aaKnown RBP9.81□□□□□ -0.84
SMC1A-204ENST00000463684 TMEM128Q5BJH2 165 aa9.81□□□□□ -0.84
SMC1A-204ENST00000463684 PATE2Q6UY27 113 aa9.81□□□□□ -0.84
SMC1A-204ENST00000463684 BPIFA4PQ86YQ2 179 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms