RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 USF3Q68DE3 2245 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 PVRIGQ6DKI7 326 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 LINC00322Q6ZN03 302 aaPredicted RBP4.08□□□□□ -1.76
CDHR3-202ENST00000461766 ZNF788Q6ZQV5 615 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 ASCL5Q7RTU5 278 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 MOB3BQ86TA1 216 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 CEND1Q8N111 149 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 LYPD1Q8N2G4 141 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 Q8NA96 180 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 TMEM167AQ8TBQ9 72 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 DSCAML1Q8TD84 2053 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 NPIPB3Q92617 1050 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 ARPC1AQ92747 370 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 PRELID3AQ96N28 172 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 MCRIP2Q9BUT9 160 aaKnown RBP4.08□□□□□ -1.76
CDHR3-202ENST00000461766 TTTY12Q9BZ98 90 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 SLC25A39Q9BZJ4 359 aaPredicted RBP4.08□□□□□ -1.76
CDHR3-202ENST00000461766 ZNF407Q9C0G0 2248 aa4.08□□□□□ -1.76
CDHR3-202ENST00000461766 RIF1Q5UIP0 2472 aaKnown RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 RTTNQ86VV8 2226 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 DIDO1Q9BTC0 2240 aaKnown RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 MED12Q93074 2177 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 TRAV26-1A0A087WT03 109 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 A0A1B0GWB2 263 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 IGLL5B9A064 214 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 NTN3O00634 580 aaPredicted RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 IGKCP01834 107 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 CRYGCP07315 174 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 ARMS2P0C7Q2 107 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 IGHV1-2P23083 117 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 CD24P25063 80 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 IFI27P40305 119 aaPredicted RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 NBL1P41271 181 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 MAGEA5P43359 124 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 CCL11P51671 97 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 ZNF138P52744 262 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 CRYBA4P53673 196 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 FXYD2P54710 66 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 PAX8Q06710 450 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 FOXE3Q13461 319 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 PLGLAQ15195 96 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 TWIST1Q15672 202 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 Q5PR19 223 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 FAM104BQ5XKR9 115 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 TMEM108Q6UXF1 575 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 ZNF833PQ6ZTB9 187 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 S100A7AQ86SG5 101 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 SAP25Q8TEE9 199 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 SRSF12Q8WXF0 261 aaKnown RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 ZC2HC1AQ96GY0 325 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 RITA1Q96K30 269 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 C8orf49Q96NF6 230 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 SPAG8Q99932 426 aaPredicted RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 NAA38Q9BRA0 125 aaKnown RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 C1QTNF4Q9BXJ3 329 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 MAP1LC3AQ9H492 121 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 GEMIN7Q9H840 131 aaKnown RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 NXT2Q9NPJ8 142 aaKnown RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 SPANXA1Q9NS26 97 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 RPUSD1Q9UJJ7 312 aaKnown RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 HIGD1AQ9Y241 93 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 TIMM8BQ9Y5J9 83 aaPredicted RBP4.07□□□□□ -1.76
CDHR3-202ENST00000461766 NCOR2Q9Y618 2525 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 EPG5Q9HCE0 2579 aa4.07□□□□□ -1.76
CDHR3-202ENST00000461766 RAI1Q7Z5J4 1906 aaPredicted RBP4.06□□□□□ -1.76
CDHR3-202ENST00000461766 TRBV25-1A0A075B6N4 114 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 IGHV3-64DA0A0J9YX35 117 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 D6R8Y8 96 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 H3BMG7 143 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 KLRC4-KLRK1H3BQV0 150 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 NKX2-8O15522 239 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 NDUFS7O75251 213 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 DPM2O94777 84 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 GOSR1O95249 250 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 TSPAN13O95857 204 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 IGKV3-15P01624 115 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 IGLV2-11P01706 119 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 TFF1P04155 84 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 MYOD1P15172 320 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 COL8A2P25067 703 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 FCER1GP30273 86 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 TCTAP57738 103 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 SSBP2P81877 361 aaPredicted RBP4.06□□□□□ -1.76
CDHR3-202ENST00000461766 WFDC2Q14508 124 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 RRN3P1Q2M238 152 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 VMA21Q3ZAQ7 101 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 KLF17Q5JT82 389 aaPredicted RBP4.06□□□□□ -1.76
CDHR3-202ENST00000461766 ASPHD1Q5U4P2 390 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 CFAP161Q6P656 301 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 ZNF562Q6V9R5 426 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 LINC00696Q6ZRV3 163 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 Q6ZT83 130 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 PRNTQ86SH4 94 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 PCP2Q8IVA1 136 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 C8orf31Q8N9H6 132 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 TMEM116Q8NCL8 245 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 OR4C13Q8NGP0 309 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 HARBI1Q96MB7 349 aa4.06□□□□□ -1.76
CDHR3-202ENST00000461766 SCNM1Q9BWG6 230 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms