RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 SPANXN5Q5MJ07 72 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 TMEM244Q5VVB8 128 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 PRR15Q8IV56 129 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 MMGT1Q8N4V1 131 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 TEX29Q8N6K0 151 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 C3orf56Q8N813 242 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 C9orf163Q8N9P6 203 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 OR4B1Q8NGF8 309 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 OR51A4Q8NGJ6 313 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 OR5H6Q8NGV6 325 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 ZNF418Q8TF45 676 aaPredicted RBP0.89□□□□□ -2.27
SYPL1-203ENST00000460770 CHCHD1Q96BP2 118 aaKnown RBP0.89□□□□□ -2.27
SYPL1-203ENST00000460770 CXCL16Q9H2A7 254 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 LHFPL6Q9Y693 200 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 BRWD1Q9NSI6 2320 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 SDK1Q7Z5N4 2213 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 FREM3P0C091 2139 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 BCL9O00512 1426 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 CDK5RAP2Q96SN8 1893 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 ADAMTS7Q9UKP4 1686 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 CEP164Q9UPV0 1460 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 A0A087WX48 190 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 TRAV14DV4A0A0A6YYC5 116 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.88□□□□□ -2.27
SYPL1-203ENST00000460770 IGHV1-58A0A0C4DH39 117 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 OR2T8A6NH00 312 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 TPST1O60507 370 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 UBL3O95164 117 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 OR2H2O95918 312 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 MT-ND4LP03901 98 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 ASAH2BP0C7U1 165 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 BAALC-AS2P0C853 105 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 TPT1P13693 172 aaKnown RBP0.88□□□□□ -2.27
SYPL1-203ENST00000460770 RAB5CP51148 216 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 MRPS36P82909 103 aaKnown RBP0.88□□□□□ -2.27
SYPL1-203ENST00000460770 PSG9Q00887 426 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 HIST1H1AQ02539 215 aaPredicted RBP0.88□□□□□ -2.27
SYPL1-203ENST00000460770 ZNF846Q147U1 533 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 ELOBQ15370 118 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 TPRXLQ17RH7 258 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 KRTAP21-3Q3LHN1 58 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 RPL13AP3Q6NVV1 102 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 ZNF826PQ6ZT77 177 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 Q8IYB0 196 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 LINC00301Q8NCQ3 95 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 BRK1Q8WUW1 75 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 MAGOHBQ96A72 148 aaKnown RBP0.88□□□□□ -2.27
SYPL1-203ENST00000460770 PRELID3AQ96N28 172 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 MCEEQ96PE7 176 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 LINC00467Q9BRT7 94 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 U3KQ87 197 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 TNRC6AQ8NDV7 1962 aaKnown RBP0.88□□□□□ -2.27
SYPL1-203ENST00000460770 EXPH5Q8NEV8 1989 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 CCDC171Q6TFL3 1326 aa0.88□□□□□ -2.27
SYPL1-203ENST00000460770 MYH1P12882 1939 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 MED13Q9UHV7 2174 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 CAMSAP2Q08AD1 1489 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 MYO18AQ92614 2054 aaKnown RBP0.87□□□□□ -2.27
SYPL1-203ENST00000460770 UNC13CQ8NB66 2214 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 MEIKINA0A087WXM9 373 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 TRBV27A0A0K0K1C4 114 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 CCDC160A6NGH7 325 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 FAM25AB3EWG3 89 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 FAM25CB3EWG5 89 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 FAM25GB3EWG6 89 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 C17orf112F2Z3M2 114 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 M0R233 179 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 NDUFA2O43678 99 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 SNRNP200O75643 2136 aaKnown RBP0.87□□□□□ -2.27
SYPL1-203ENST00000460770 GPX1P07203 203 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 SCTP09683 121 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 MPC1LP0DKB6 136 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 EVI2AP22794 236 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 CRYGSP22914 178 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 KDELR1P24390 212 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 SSR2P43308 183 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 NCS1P62166 190 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 KLRD1Q13241 179 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 CIRBPQ14011 172 aaKnown RBP0.87□□□□□ -2.27
SYPL1-203ENST00000460770 CDK5R1Q15078 307 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 NEDD8Q15843 81 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 Q1T7F1 81 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 DEFB115Q30KQ5 88 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 PHF5AQ7RTV0 110 aaKnown RBP0.87□□□□□ -2.27
SYPL1-203ENST00000460770 RPS19BP1Q86WX3 136 aaKnown RBP0.87□□□□□ -2.27
SYPL1-203ENST00000460770 LINC00311Q8N616 119 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 FAM216BQ8N7L0 139 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 OR8J3Q8NGG0 315 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 TMEM254Q8TBM7 123 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 SPACA4Q8TDM5 124 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 ZNF431Q8TF32 576 aaPredicted RBP0.87□□□□□ -2.27
SYPL1-203ENST00000460770 TP53RKQ96S44 253 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 TPT1P8Q9HAU6 139 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 C14orf132Q9NPU4 83 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 CBLN4Q9NTU7 201 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 TPRKBQ9Y3C4 175 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 CR1P17927 2039 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 CD109Q6YHK3 1445 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 PTPRFP10586 1907 aa0.87□□□□□ -2.27
SYPL1-203ENST00000460770 MYH13Q9UKX3 1938 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms