RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 ACOT7LQ6ZUV0 252 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 LRRC20Q8TCA0 184 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 RAB2BQ8WUD1 216 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 RPUSD4Q96CM3 377 aaKnown RBP8.56□□□□□ -1.04
GPNMB-204ENST00000459927 UHRF2Q96PU4 802 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 NPVFQ9HCQ7 196 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 PSENENQ9NZ42 101 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 H3BP45 60 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 H7BYZ3 331 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 MRPS12O15235 138 aaKnown RBP8.55□□□□□ -1.04
GPNMB-204ENST00000459927 ANXA7P20073 488 aaKnown RBP8.55□□□□□ -1.04
GPNMB-204ENST00000459927 POLR2GP62487 172 aaKnown RBP eCLIP8.55□□□□□ -1.04
GPNMB-204ENST00000459927 KIR3DS1Q14943 382 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 TOMM5Q8N4H5 51 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 LINC00612Q8N6U2 182 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 RNASE8Q8TDE3 154 aaKnown RBP8.55□□□□□ -1.04
GPNMB-204ENST00000459927 RXFP4Q8TDU9 374 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 GNPNAT1Q96EK6 184 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-204ENST00000459927 ZNF503Q96F45 646 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 SMIM8Q96KF7 97 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 BCL7BQ9BQE9 202 aa8.55□□□□□ -1.04
GPNMB-204ENST00000459927 TRAV26-1A0A087WT03 109 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 SMCO3A2RU48 225 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 LINC00869P0C866 280 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 AP3S2P59780 193 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 C4orf46Q504U0 113 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 PYDC2Q56P42 97 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 S100A7AQ86SG5 101 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 OR10J6PQ8NGY7 276 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 TMEM263Q8WUH6 116 aaKnown RBP8.54□□□□□ -1.04
GPNMB-204ENST00000459927 KRTAP1-5Q9BYS1 174 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 ARL6Q9H0F7 186 aa8.54□□□□□ -1.04
GPNMB-204ENST00000459927 A0A0J9YY99 117 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 ZNF701M0R085 212 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-204ENST00000459927 ADAP1O75689 374 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 BTF3P20290 206 aaKnown RBP8.53□□□□□ -1.04
GPNMB-204ENST00000459927 M6PRP20645 277 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 HOXA5P20719 270 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 CCDC28AQ8IWP9 274 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 MCFD2Q8NI22 146 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 TRIM63Q969Q1 353 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 C20orf144Q9BQM9 153 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 UPK3BQ9BT76 320 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 ARV1Q9H2C2 271 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 Q9H3A6 140 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 ZNF331Q9NQX6 463 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-204ENST00000459927 RNF24Q9Y225 148 aa8.53□□□□□ -1.04
GPNMB-204ENST00000459927 A0A1W2PPQ1 181 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 C9orf170A2RU37 121 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 PRAC2D3DTV9 90 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 FNDC10F2Z333 226 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 H3BNG1 76 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 K7EPK0 472 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 CCNKO75909 580 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 SNRPCP09234 159 aaKnown RBP8.52□□□□□ -1.05
GPNMB-204ENST00000459927 RRAS2P62070 204 aaPredicted RBP8.52□□□□□ -1.05
GPNMB-204ENST00000459927 DLK1P80370 383 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 TMEM14EPQ6UXP3 125 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 ZBTB8BQ8NAP8 495 aaPredicted RBP8.52□□□□□ -1.05
GPNMB-204ENST00000459927 DEDD2Q8WXF8 326 aa8.52□□□□□ -1.05
GPNMB-204ENST00000459927 GAGE12BA1L429 117 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 GAGE7O76087 117 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 GAGE12FP0CL80 117 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 GAGE12GP0CL81 117 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 GAGE12IP0CL82 117 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 PXDC1Q5TGL8 231 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 TEPPQ6URK8 271 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 LINC00305Q7Z4B0 112 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 OR10P1Q8NGE3 313 aa8.51□□□□□ -1.05
GPNMB-204ENST00000459927 PARD6GQ9BYG4 376 aaPredicted RBP8.51□□□□□ -1.05
GPNMB-204ENST00000459927 H3BMQ9 156 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 GOSR2O14653 212 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 RLN2P04090 185 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 METTL15P1P0C7V9 234 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 CT45A10P0DMU9 189 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 CXCL2P19875 107 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 UBE2MP61081 183 aaKnown RBP8.5□□□□□ -1.05
GPNMB-204ENST00000459927 GFI1BQ5VTD9 330 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 LCN15Q6UWW0 184 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 CCDC190Q86UF4 302 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 ZNF431Q8TF32 576 aaPredicted RBP8.5□□□□□ -1.05
GPNMB-204ENST00000459927 TMEM37Q8WXS4 190 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 SAT2Q96F10 170 aaPredicted RBP8.5□□□□□ -1.05
GPNMB-204ENST00000459927 SLC50A1Q9BRV3 221 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 ZNF586Q9NXT0 402 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 MRPS16Q9Y3D3 137 aaKnown RBP8.5□□□□□ -1.05
GPNMB-204ENST00000459927 V9GYH0 126 aa8.5□□□□□ -1.05
GPNMB-204ENST00000459927 SNURFLB1AK76 121 aa8.49□□□□□ -1.05
GPNMB-204ENST00000459927 AGPAT2O15120 278 aa8.49□□□□□ -1.05
GPNMB-204ENST00000459927 SSSCA1O60232 199 aa8.49□□□□□ -1.05
GPNMB-204ENST00000459927 SLC38A11Q08AI6 406 aa8.49□□□□□ -1.05
GPNMB-204ENST00000459927 ARL16Q0P5N6 197 aa8.49□□□□□ -1.05
GPNMB-204ENST00000459927 DAZ2Q13117 558 aaKnown RBP8.49□□□□□ -1.05
GPNMB-204ENST00000459927 BPIFA4PQ86YQ2 179 aa8.49□□□□□ -1.05
GPNMB-204ENST00000459927 VSIG2Q96IQ7 327 aa8.49□□□□□ -1.05
GPNMB-204ENST00000459927 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
GPNMB-204ENST00000459927 HERC1Q15751 4861 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 TRAV12-3A0A0B4J271 114 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms