RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 TRIOBPQ9H2D6 2365 aa13.01□□□□□ -0.33
HDAC7-217ENST00000459625 A0A087X0K7 114 aa13.01□□□□□ -0.33
HDAC7-217ENST00000459625 SEC11AP67812 179 aa13.01□□□□□ -0.33
HDAC7-217ENST00000459625 IFI6P09912 130 aa13.01□□□□□ -0.33
HDAC7-217ENST00000459625 LY6G5BQ8NDX9 201 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 CHCHD1Q96BP2 118 aaKnown RBP13□□□□□ -0.33
HDAC7-217ENST00000459625 RPP25LQ8N5L8 163 aaKnown RBP13□□□□□ -0.33
HDAC7-217ENST00000459625 IGHV1-69DA0A0B4J2H0 117 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 IGHV1-69P01742 117 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 CADP27708 2225 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 ESM1Q9NQ30 184 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 IGLV3-12A0A075B6K2 115 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 TRAV26-2A0A0B4J265 109 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 IGHG3P01860 377 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
HDAC7-217ENST00000459625 GAGE2BQ13066 116 aa12.99□□□□□ -0.33
HDAC7-217ENST00000459625 RSPO3Q9BXY4 272 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-217ENST00000459625 IGFBP3P17936 291 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-217ENST00000459625 SIGMAR1Q99720 223 aa12.99□□□□□ -0.33
HDAC7-217ENST00000459625 TMEM170AQ8WVE7 144 aa12.99□□□□□ -0.33
HDAC7-217ENST00000459625 DOCK7Q96N67 2140 aa12.99□□□□□ -0.33
HDAC7-217ENST00000459625 SCN4AP35499 1836 aa12.99□□□□□ -0.33
HDAC7-217ENST00000459625 IGKV1-27A0A075B6S5 117 aa12.99□□□□□ -0.33
HDAC7-217ENST00000459625 TRGV9Q99603 122 aa12.99□□□□□ -0.33
HDAC7-217ENST00000459625 TRPT1Q86TN4 253 aaKnown RBP12.98□□□□□ -0.33
HDAC7-217ENST00000459625 RNF126Q9BV68 326 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 TP53TG1Q9Y2A0 90 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 TRAV9-1A0A075B6T8 112 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 IGHV4-28A0A0C4DH34 117 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 TEX48A0A1B0GUV7 120 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 C9JAW5 83 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 DOCK3Q8IZD9 2030 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 ZFAND6Q6FIF0 208 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 GNB1LQ9BYB4 327 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 TNS1Q9HBL0 1735 aaKnown RBP12.98□□□□□ -0.33
HDAC7-217ENST00000459625 SPTA1P02549 2419 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 XCL1P47992 114 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 TCF15Q12870 199 aa12.98□□□□□ -0.33
HDAC7-217ENST00000459625 LINC00473A8K010 186 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 CRLF1O75462 422 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 NUP35Q8NFH5 326 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 TMEM243Q9BU79 118 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 IGKV1D-17A0A075B6S4 117 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 C5orf63A6NC05 138 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 RNF222A6NCQ9 220 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 K7ENP7 123 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 CACNA1DQ01668 2161 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
HDAC7-217ENST00000459625 NOP10Q9NPE3 64 aaKnown RBP12.97□□□□□ -0.33
HDAC7-217ENST00000459625 ARFGEF1Q9Y6D6 1849 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 HSD52Q0P140 79 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 FAM120AOSQ5T036 256 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 TCF20Q9UGU0 1960 aaKnown RBP12.97□□□□□ -0.33
HDAC7-217ENST00000459625 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-217ENST00000459625 OOSP1A8MZH6 123 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 DOCK6Q96HP0 2047 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
HDAC7-217ENST00000459625 NEUROG3Q9Y4Z2 214 aa12.96□□□□□ -0.33
HDAC7-217ENST00000459625 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.33
HDAC7-217ENST00000459625 NDUFS8O00217 210 aa12.96□□□□□ -0.33
HDAC7-217ENST00000459625 IGKV1-16P04430 117 aa12.96□□□□□ -0.33
HDAC7-217ENST00000459625 IGFBPL1Q8WX77 278 aa12.96□□□□□ -0.33
HDAC7-217ENST00000459625 REG4Q9BYZ8 158 aa12.96□□□□□ -0.33
HDAC7-217ENST00000459625 LINC00114Q6XXX2 140 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 MPDZO75970 2070 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 COL6A6A6NMZ7 2263 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 RS1O15537 224 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 IGHV3-30P01768 117 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 IGHV3-33P01772 117 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 IGHV3-30-3P0DP02 117 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 ZNF581Q9P0T4 197 aa12.96□□□□□ -0.34
HDAC7-217ENST00000459625 TINCRA0A1B0GVN0 87 aa12.95□□□□□ -0.34
HDAC7-217ENST00000459625 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
HDAC7-217ENST00000459625 NDUFB8O95169 186 aa12.95□□□□□ -0.34
HDAC7-217ENST00000459625 MORN5Q5VZ52 161 aa12.95□□□□□ -0.34
HDAC7-217ENST00000459625 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
HDAC7-217ENST00000459625 CEP250Q9BV73 2442 aa12.95□□□□□ -0.34
HDAC7-217ENST00000459625 NTF4P34130 210 aa12.95□□□□□ -0.34
HDAC7-217ENST00000459625 HEATR1Q9H583 2144 aaKnown RBP12.95□□□□□ -0.34
HDAC7-217ENST00000459625 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
HDAC7-217ENST00000459625 GAS1P54826 345 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 ATRAIDQ6UW56 229 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 WDR83OSQ9Y284 106 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 SDK2Q58EX2 2172 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 KIF13BQ9NQT8 1826 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 CRYGCP07315 174 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 GLRX5Q86SX6 157 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 AGMATQ9BSE5 352 aa12.94□□□□□ -0.34
HDAC7-217ENST00000459625 SOCS3O14543 225 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 PLXNA1Q9UIW2 1896 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 HLA-DRB4P13762 266 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 C5orf47Q569G3 176 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 OVOL2Q9BRP0 275 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 HLA-DRB4X5D2U9 266 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms