RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 C20orf144Q9BQM9 153 aa9.1□□□□□ -0.95
EPCAM-204ENST00000456133 RPL7P18124 248 aaKnown RBP9.09□□□□□ -0.95
EPCAM-204ENST00000456133 Q6ZTI0 123 aa9.09□□□□□ -0.95
EPCAM-204ENST00000456133 TMED4Q7Z7H5 227 aa9.09□□□□□ -0.95
EPCAM-204ENST00000456133 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
EPCAM-204ENST00000456133 LRRC20Q8TCA0 184 aa9.09□□□□□ -0.95
EPCAM-204ENST00000456133 RPUSD4Q96CM3 377 aaKnown RBP9.09□□□□□ -0.95
EPCAM-204ENST00000456133 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
EPCAM-204ENST00000456133 A0A087X0K7 114 aa9.08□□□□□ -0.96
EPCAM-204ENST00000456133 PRSS46E5RG02 174 aa9.08□□□□□ -0.96
EPCAM-204ENST00000456133 GFI1BQ5VTD9 330 aa9.08□□□□□ -0.96
EPCAM-204ENST00000456133 C15orf40Q8WUR7 153 aa9.08□□□□□ -0.96
EPCAM-204ENST00000456133 HIGD1AQ9Y241 93 aa9.08□□□□□ -0.96
EPCAM-204ENST00000456133 PITX3O75364 302 aa9.07□□□□□ -0.96
EPCAM-204ENST00000456133 AKAIN1P0CW23 69 aa9.07□□□□□ -0.96
EPCAM-204ENST00000456133 RAP2BP61225 183 aa9.07□□□□□ -0.96
EPCAM-204ENST00000456133 AKR1C1Q04828 323 aa9.07□□□□□ -0.96
EPCAM-204ENST00000456133 SSBP1Q04837 148 aaKnown RBP9.07□□□□□ -0.96
EPCAM-204ENST00000456133 OR51S1Q8NGJ8 323 aa9.07□□□□□ -0.96
EPCAM-204ENST00000456133 FUNDC2Q9BWH2 189 aa9.07□□□□□ -0.96
EPCAM-204ENST00000456133 VCX3AQ9NNX9 186 aa9.07□□□□□ -0.96
EPCAM-204ENST00000456133 ATP6V1G2O95670 118 aa9.06□□□□□ -0.96
EPCAM-204ENST00000456133 PRRT1Q99946 306 aa9.06□□□□□ -0.96
EPCAM-204ENST00000456133 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 J3KRW8 73 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 WRBO00258 174 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 HYPMO75409 117 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 IL5P05113 134 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 OR5G3P0C626 314 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 DAZ2Q13117 558 aaKnown RBP9.05□□□□□ -0.96
EPCAM-204ENST00000456133 CYP2G1PQ6ZSU1 146 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 CCDC190Q86UF4 302 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 CLVS1Q8IUQ0 354 aaPredicted RBP9.05□□□□□ -0.96
EPCAM-204ENST00000456133 AP3S1Q92572 193 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 DNAH8Q96JB1 4490 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 TRAV12-3A0A0B4J271 114 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 SRPXP78539 464 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 ACOT7LQ6ZUV0 252 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 MIXL1Q9H2W2 232 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
EPCAM-204ENST00000456133 UBR4Q5T4S7 5183 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 A0A087WXM4 84 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 PMS2P5A8MQ11 134 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 PRAC2D3DTV9 90 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 MRPS12O15235 138 aaKnown RBP9.04□□□□□ -0.96
EPCAM-204ENST00000456133 MED6O75586 246 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 SNRPCP09234 159 aaKnown RBP9.04□□□□□ -0.96
EPCAM-204ENST00000456133 LINC00869P0C866 280 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 ANXA3P12429 323 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 RPP30P78346 268 aaKnown RBP9.04□□□□□ -0.96
EPCAM-204ENST00000456133 MRPS10P82664 201 aaKnown RBP9.04□□□□□ -0.96
EPCAM-204ENST00000456133 SPANXN5Q5MJ07 72 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 SMIM4Q8WVI0 70 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 CIB3Q96Q77 187 aaPredicted RBP9.04□□□□□ -0.96
EPCAM-204ENST00000456133 TMEM70Q9BUB7 260 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 HMCN2Q8NDA2 5059 aa9.04□□□□□ -0.96
EPCAM-204ENST00000456133 TRAV9-2A0A087WT02 112 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 SMCO3A2RU48 225 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 H3BP45 60 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 PAX4O43316 350 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 SYNGR2O43760 224 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 ANXA7P20073 488 aaKnown RBP9.03□□□□□ -0.96
EPCAM-204ENST00000456133 PLP1P60201 277 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 LYPD5Q6UWN5 251 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 SCGB3A2Q96PL1 93 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 PYGO2Q9BRQ0 406 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 ZNF331Q9NQX6 463 aaPredicted RBP9.03□□□□□ -0.96
EPCAM-204ENST00000456133 GSN-AS1Q9NRJ2 163 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 MSRB1Q9NZV6 116 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 FUT9Q9Y231 359 aa9.03□□□□□ -0.96
EPCAM-204ENST00000456133 TRGV1A0A0A0MS02 117 aa9.02□□□□□ -0.97
EPCAM-204ENST00000456133 KRTAP29-1A8MX34 341 aaPredicted RBP9.02□□□□□ -0.97
EPCAM-204ENST00000456133 ZNF324O75467 553 aaPredicted RBP9.02□□□□□ -0.97
EPCAM-204ENST00000456133 LCN15Q6UWW0 184 aa9.02□□□□□ -0.97
EPCAM-204ENST00000456133 PATE2Q6UY27 113 aa9.02□□□□□ -0.97
EPCAM-204ENST00000456133 LINC00467Q9BRT7 94 aa9.02□□□□□ -0.97
EPCAM-204ENST00000456133 SLC50A1Q9BRV3 221 aa9.02□□□□□ -0.97
EPCAM-204ENST00000456133 ARL6Q9H0F7 186 aa9.02□□□□□ -0.97
EPCAM-204ENST00000456133 SCP2D1Q9UJQ7 156 aa9.02□□□□□ -0.97
EPCAM-204ENST00000456133 LY96Q9Y6Y9 160 aa9.02□□□□□ -0.97
EPCAM-204ENST00000456133 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
EPCAM-204ENST00000456133 LINC00854A0A1B0GVQ3 168 aa9.01□□□□□ -0.97
EPCAM-204ENST00000456133 DUXBA0A1W2PPF3 345 aa9.01□□□□□ -0.97
EPCAM-204ENST00000456133 NPIPB6E9PJ23 425 aa9.01□□□□□ -0.97
EPCAM-204ENST00000456133 CT45A10P0DMU9 189 aa9.01□□□□□ -0.97
EPCAM-204ENST00000456133 CXCL2P19875 107 aa9.01□□□□□ -0.97
EPCAM-204ENST00000456133 NAA50Q9GZZ1 169 aaKnown RBP9.01□□□□□ -0.97
EPCAM-204ENST00000456133 STRAPQ9Y3F4 350 aaKnown RBP9.01□□□□□ -0.97
EPCAM-204ENST00000456133 ANKRD20A5PA0PJZ0 165 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 H3BTX0 84 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 RGS5O15539 181 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 IGHV3-53P01767 116 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 SLC25A6P12236 298 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 LEPP41159 167 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 ZBTB8BQ8NAP8 495 aaPredicted RBP9□□□□□ -0.97
EPCAM-204ENST00000456133 C11orf72Q8NBR9 251 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 ZNF431Q8TF32 576 aaPredicted RBP9□□□□□ -0.97
EPCAM-204ENST00000456133 MCUBQ9NWR8 336 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 SLC17A3O00476 420 aa9□□□□□ -0.97
EPCAM-204ENST00000456133 CTDSP2O14595 271 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms