RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 TMEM167BQ9NRX6 74 aa7.74□□□□□ -1.17
LINC01940-201ENST00000455228 TRBV7-7A0A0K0K1E9 115 aa7.74□□□□□ -1.17
LINC01940-201ENST00000455228 GCSHP23434 173 aa7.74□□□□□ -1.17
LINC01940-201ENST00000455228 PRDX2P32119 198 aa7.74□□□□□ -1.17
LINC01940-201ENST00000455228 ZNF331Q9NQX6 463 aaPredicted RBP7.74□□□□□ -1.17
LINC01940-201ENST00000455228 MED13Q9UHV7 2174 aa7.74□□□□□ -1.17
LINC01940-201ENST00000455228 TNRC18O15417 2968 aaPredicted RBP7.74□□□□□ -1.17
LINC01940-201ENST00000455228 COL8A2P25067 703 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 CNEP1R1Q8N9A8 125 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 NUP35Q8NFH5 326 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 SNRNP40Q96DI7 357 aaKnown RBP7.73□□□□□ -1.17
LINC01940-201ENST00000455228 SGK494Q96LW2 274 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 RASL11BQ9BPW5 248 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 WDFY4Q6ZS81 3184 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 TRGV5A0A0B4J1U4 118 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 C11orf53Q8IXP5 236 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 LSM4Q9Y4Z0 139 aaKnown RBP7.73□□□□□ -1.17
LINC01940-201ENST00000455228 A0A1B0GXF2 115 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 C16orf97H3BN30 126 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 IGHV1-2P23083 117 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 CNTFRP26992 372 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 SIGLEC15Q6ZMC9 328 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 ATP5L2Q7Z4Y8 100 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 OR2T6Q8NHC8 308 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 C21orf62Q9NYP8 219 aa7.73□□□□□ -1.17
LINC01940-201ENST00000455228 EPM2AB3EWF7 344 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 PROP1O75360 226 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 TAS2R45P59539 299 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 EBI3Q14213 229 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 LPAL2Q16609 132 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 ZNF672Q499Z4 452 aaPredicted RBP7.72□□□□□ -1.17
LINC01940-201ENST00000455228 ASCL5Q7RTU5 278 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 LEAP2Q969E1 77 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 LINC00526Q96FQ7 95 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 KIR2DL4Q99706 377 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 NABP2Q9BQ15 211 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 PRORYQ9H606 182 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 FOXA2Q9Y261 457 aaPredicted RBP7.72□□□□□ -1.17
LINC01940-201ENST00000455228 MAP1BP46821 2468 aaKnown RBP7.72□□□□□ -1.17
LINC01940-201ENST00000455228 RAI1Q7Z5J4 1906 aaPredicted RBP7.72□□□□□ -1.17
LINC01940-201ENST00000455228 HEATR1Q9H583 2144 aaKnown RBP7.72□□□□□ -1.17
LINC01940-201ENST00000455228 PRSS46E5RG02 174 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 IGLC6P0CF74 106 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 HSPE1P61604 102 aaKnown RBP7.72□□□□□ -1.17
LINC01940-201ENST00000455228 CD177Q8N6Q3 437 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 TMEM105Q8N8V8 129 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 SPRY4Q9C004 299 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 SVILO95425 2214 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 C15orf61A6NNL5 157 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 NBR2O15453 112 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 TTC32Q5I0X7 151 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 OR1L8Q8NGR8 309 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 NBEAQ8NFP9 2946 aa7.72□□□□□ -1.17
LINC01940-201ENST00000455228 ICE1Q9Y2F5 2266 aa7.71□□□□□ -1.17
LINC01940-201ENST00000455228 LGALS9BQ3B8N2 356 aa7.71□□□□□ -1.17
LINC01940-201ENST00000455228 LGALS9CQ6DKI2 356 aa7.71□□□□□ -1.17
LINC01940-201ENST00000455228 DEFB123Q8N688 67 aa7.71□□□□□ -1.17
LINC01940-201ENST00000455228 TRGV8A0A0C4DH27 118 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 RRN3P1Q2M238 152 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 HILPDAQ9Y5L2 63 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 TNCP24821 2201 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 IGHV3OR15-7A0A075B7D8 119 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 TRAV5A0A0B4J249 113 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 TRAV4A0A0B4J268 109 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 LEPROTL1O95214 131 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 ZNF134P52741 427 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 GUSBP1Q15486 140 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 C6orf226Q5I0X4 101 aa7.71□□□□□ -1.18
LINC01940-201ENST00000455228 SLC25A10Q9UBX3 287 aaPredicted RBP7.71□□□□□ -1.18
LINC01940-201ENST00000455228 MGST3O14880 152 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 CRYGAP11844 174 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 FAM231DQ6ZW35 169 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 ZNRF1Q8ND25 227 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 C1orf159Q96HA4 380 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 TET2Q6N021 2002 aaPredicted RBP7.7□□□□□ -1.18
LINC01940-201ENST00000455228 ATP5G1P05496 136 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 FXYD2P54710 66 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 MFAP2P55001 183 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 PRR20EP86478 221 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 PRR20CP86479 221 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 PRR20DP86480 221 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 PRR20BP86481 221 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 PRR20AP86496 221 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 MZT1Q08AG7 82 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 KLF17Q5JT82 389 aaPredicted RBP7.7□□□□□ -1.18
LINC01940-201ENST00000455228 GDF5OSQ5U4N7 250 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 TMEM158Q8WZ71 300 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 IMUPQ9GZP8 106 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 SPRR3Q9UBC9 169 aa7.7□□□□□ -1.18
LINC01940-201ENST00000455228 TINCRA0A1B0GVN0 87 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 LY6LH3BQJ8 138 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 MOB3BQ86TA1 216 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 CEND1Q8N111 149 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 C3orf22Q8N5N4 141 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 TMEM86BQ8N661 226 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 POM121L12Q8N7R1 296 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 RAB37Q96AX2 223 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 TCRBV4S1A1TA0A5B7 111 aa7.69□□□□□ -1.18
LINC01940-201ENST00000455228 UBE2L3P68036 154 aaKnown RBP7.69□□□□□ -1.18
LINC01940-201ENST00000455228 KLRB1Q12918 225 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms