RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 DISC1C4P0D8 188 aa6.74□□□□□ -1.33
CLCN4-204ENST00000454850 H3BRN7 92 aa6.74□□□□□ -1.33
CLCN4-204ENST00000454850 ATP5IP56385 69 aaPredicted RBP6.74□□□□□ -1.33
CLCN4-204ENST00000454850 SURF2Q15527 256 aaPredicted RBP6.74□□□□□ -1.33
CLCN4-204ENST00000454850 GFI1BQ5VTD9 330 aa6.74□□□□□ -1.33
CLCN4-204ENST00000454850 CCDC190Q86UF4 302 aa6.74□□□□□ -1.33
CLCN4-204ENST00000454850 NFE4Q86UQ8 179 aa6.74□□□□□ -1.33
CLCN4-204ENST00000454850 GPR132Q9UNW8 380 aa6.74□□□□□ -1.33
CLCN4-204ENST00000454850 KCNIP3Q9Y2W7 256 aa6.74□□□□□ -1.33
CLCN4-204ENST00000454850 TRGV2A0A075B6R0 118 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 A0A0B4J2A0 478 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 SNRPCP09234 159 aaKnown RBP6.73□□□□□ -1.33
CLCN4-204ENST00000454850 OR5G3P0C626 314 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 AKR1C4P17516 323 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 RPL7P18124 248 aaKnown RBP6.73□□□□□ -1.33
CLCN4-204ENST00000454850 S100A7P31151 101 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 RAP2BP61225 183 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 MZT2AQ6P582 158 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 SHANK2-AS3Q9BTD1 123 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 SHPKQ9UHJ6 478 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 HIGD1AQ9Y241 93 aa6.73□□□□□ -1.33
CLCN4-204ENST00000454850 PKHD1L1Q86WI1 4243 aa6.72□□□□□ -1.33
CLCN4-204ENST00000454850 IGLV5-52A0A0A0MRZ9 124 aa6.72□□□□□ -1.33
CLCN4-204ENST00000454850 SMCO3A2RU48 225 aa6.72□□□□□ -1.33
CLCN4-204ENST00000454850 OR51S1Q8NGJ8 323 aa6.72□□□□□ -1.33
CLCN4-204ENST00000454850 C20orf144Q9BQM9 153 aa6.72□□□□□ -1.33
CLCN4-204ENST00000454850 VCX3AQ9NNX9 186 aa6.72□□□□□ -1.33
CLCN4-204ENST00000454850 ICOSQ9Y6W8 199 aa6.72□□□□□ -1.33
CLCN4-204ENST00000454850 A0A087X0K7 114 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 TRGV1A0A0A0MS02 117 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 TRAV12-3A0A0B4J271 114 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 PRSS46E5RG02 174 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 NPIPB6E9PJ23 425 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 H3BP45 60 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 WRBO00258 174 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 PAX4O43316 350 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 HYPMO75409 117 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 IL5P05113 134 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 LINC00869P0C866 280 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 AKAIN1P0CW23 69 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 CYP2G1PQ6ZSU1 146 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 ACOT7LQ6ZUV0 252 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 SYT8Q8NBV8 401 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 PRRT1Q99946 306 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 FUNDC2Q9BWH2 189 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 MSRB1Q9NZV6 116 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 LY96Q9Y6Y9 160 aa6.71□□□□□ -1.34
CLCN4-204ENST00000454850 PRAC2D3DTV9 90 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 H3BTX0 84 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 IGHV3-53P01767 116 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 ANXA3P12429 323 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 ANXA7P20073 488 aaKnown RBP6.7□□□□□ -1.34
CLCN4-204ENST00000454850 DAZ2Q13117 558 aaKnown RBP6.7□□□□□ -1.34
CLCN4-204ENST00000454850 SPANXN5Q5MJ07 72 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 CLVS1Q8IUQ0 354 aaPredicted RBP6.7□□□□□ -1.34
CLCN4-204ENST00000454850 C15orf40Q8WUR7 153 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 AP3S1Q92572 193 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 LINC00467Q9BRT7 94 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 TMEM70Q9BUB7 260 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 GSN-AS1Q9NRJ2 163 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 FUT9Q9Y231 359 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
CLCN4-204ENST00000454850 TRAV9-2A0A087WT02 112 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 LINC00854A0A1B0GVQ3 168 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 PMS2P5A8MQ11 134 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 KRTAP29-1A8MX34 341 aaPredicted RBP6.69□□□□□ -1.34
CLCN4-204ENST00000454850 PITX3O75364 302 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 MED6O75586 246 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 ATP6V1G2O95670 118 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 RPP30P78346 268 aaKnown RBP6.69□□□□□ -1.34
CLCN4-204ENST00000454850 SRPXP78539 464 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 SSBP1Q04837 148 aaKnown RBP6.69□□□□□ -1.34
CLCN4-204ENST00000454850 LYPD5Q6UWN5 251 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 CIB3Q96Q77 187 aaPredicted RBP6.69□□□□□ -1.34
CLCN4-204ENST00000454850 ARL6Q9H0F7 186 aa6.69□□□□□ -1.34
CLCN4-204ENST00000454850 ZNF331Q9NQX6 463 aaPredicted RBP6.69□□□□□ -1.34
CLCN4-204ENST00000454850 A0A087WXM4 84 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 SLC17A3O00476 420 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 RGS5O15539 181 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 PSCAO43653 123 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 SYNGR2O43760 224 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 ZNF324O75467 553 aaPredicted RBP6.68□□□□□ -1.34
CLCN4-204ENST00000454850 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
CLCN4-204ENST00000454850 CT45A10P0DMU9 189 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 LEPP41159 167 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 SERTAD4-AS1Q5TG53 156 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 SMIM4Q8WVI0 70 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 C8orf49Q96NF6 230 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 PYGO2Q9BRQ0 406 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 MIXL1Q9H2W2 232 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 MCUBQ9NWR8 336 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 FAM30AQ9NZY2 134 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 SCP2D1Q9UJQ7 156 aa6.68□□□□□ -1.34
CLCN4-204ENST00000454850 STRAPQ9Y3F4 350 aaKnown RBP6.68□□□□□ -1.34
CLCN4-204ENST00000454850 MRPS12O15235 138 aaKnown RBP6.67□□□□□ -1.34
CLCN4-204ENST00000454850 PRAF2O60831 178 aa6.67□□□□□ -1.34
CLCN4-204ENST00000454850 EVI2AP22794 236 aa6.67□□□□□ -1.34
CLCN4-204ENST00000454850 RRAS2P62070 204 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms