RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TRAV20A0A0B4J274 112 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 SELENOKQ9Y6D0 94 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 IFITM10A6NMD0 228 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 CRISP2P16562 243 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 PIFOQ8TCI5 191 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 ZNF414Q96IQ9 312 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 VPS13CQ709C8 3753 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 HIGD1CA8MV81 97 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
CLK3-203ENST00000454830 TMEM183AQ8IXX5 376 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 GBGT1Q8N5D6 347 aa10.64□□□□□ -0.71
CLK3-203ENST00000454830 IGKV3-7A0A075B6H7 116 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 HIST2H2BCQ6DN03 193 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 TMSB15BA0A087X1C1 80 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 CT45A10P0DMU9 189 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 GZMBP10144 247 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 PAX1P15863 534 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 S100A7P31151 101 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 NEU1Q99519 415 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 IGKV2-40A0A087WW87 121 aaPredicted RBP10.63□□□□□ -0.71
CLK3-203ENST00000454830 IGKV2D-40P01614 121 aaPredicted RBP10.63□□□□□ -0.71
CLK3-203ENST00000454830 IGLC2P0DOY2 106 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 TMEM95Q3KNT9 176 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 Q5PR19 223 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 SIGLEC15Q6ZMC9 328 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 Q86TA4 180 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 GRAMD2BQ96HH9 432 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 TXN2Q99757 166 aa10.63□□□□□ -0.71
CLK3-203ENST00000454830 CSMD2Q7Z408 3487 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 IGHV4-59P01825 116 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 HLA-DMBP28068 263 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 DEFB112Q30KQ8 113 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 Q71RC1 249 aaPredicted RBP10.62□□□□□ -0.71
CLK3-203ENST00000454830 CCDC140Q96MF4 163 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 METTL26Q96S19 204 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 HIST1H2BLQ99880 126 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 Q6ZS46 218 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 TMEM256Q8N2U0 113 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 MEGF9Q9H1U4 602 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 ARL3P36405 182 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 WDR73Q6P4I2 378 aa10.62□□□□□ -0.71
CLK3-203ENST00000454830 LINC00322Q6ZN03 302 aaPredicted RBP10.62□□□□□ -0.71
CLK3-203ENST00000454830 RPP21Q9H633 154 aaKnown RBP10.62□□□□□ -0.71
CLK3-203ENST00000454830 PHOX2AO14813 284 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 ZNF48Q96MX3 618 aaPredicted RBP10.61□□□□□ -0.71
CLK3-203ENST00000454830 DUX5Q96PT3 197 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 TRAV9-1A0A075B6T8 112 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 IZUMO1RA6ND01 250 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 ZNF705FA8MVS1 300 aaPredicted RBP10.61□□□□□ -0.71
CLK3-203ENST00000454830 A8MWL6 223 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 NUP35Q8NFH5 326 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 SSBP4Q9BWG4 385 aaPredicted RBP10.61□□□□□ -0.71
CLK3-203ENST00000454830 SAMD10Q9BYL1 202 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 SETD2Q9BYW2 2564 aaPredicted RBP10.61□□□□□ -0.71
CLK3-203ENST00000454830 PSG9Q00887 426 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 RELQ04864 619 aaPredicted RBP10.61□□□□□ -0.71
CLK3-203ENST00000454830 TMEM18Q96B42 140 aa10.61□□□□□ -0.71
CLK3-203ENST00000454830 TRBV7-1A0A0A6YYK4 115 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 PYY3Q5JQD4 70 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 Q8TAT8 98 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 KLF12Q9Y4X4 402 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 LTAP01374 205 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 Q96MF0 132 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 KLK15Q9H2R5 256 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 ACANP16112 2415 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 SMIM27A0A1W2PRY6 76 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 APCSP02743 223 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 AMBPP02760 352 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 GATA3P23771 443 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
CLK3-203ENST00000454830 DIRC3C9JPN6 131 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 SMAD7O15105 426 aaKnown RBP10.59□□□□□ -0.71
CLK3-203ENST00000454830 SRIP30626 198 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 RNF182Q8N6D2 247 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 TRBV9A0A0B4J1U6 114 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 A6NDX4 124 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 M0QZK8 103 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 TRBV12-3P01733 135 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
CLK3-203ENST00000454830 PSG3Q16557 428 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 UBR5O95071 2799 aaPredicted RBP10.59□□□□□ -0.71
CLK3-203ENST00000454830 ZNF253O75346 499 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 DEFB113Q30KQ7 82 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 FAM231DQ6ZW35 169 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 LYPD1Q8N2G4 141 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 OR5R1Q8NH85 324 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 C8orf49Q96NF6 230 aa10.59□□□□□ -0.71
CLK3-203ENST00000454830 ZC2HC1AQ96GY0 325 aa10.58□□□□□ -0.72
CLK3-203ENST00000454830 GNB1LQ9BYB4 327 aa10.58□□□□□ -0.72
CLK3-203ENST00000454830 FBN2P35556 2912 aa10.58□□□□□ -0.72
CLK3-203ENST00000454830 CHEK1O14757 476 aa10.58□□□□□ -0.72
CLK3-203ENST00000454830 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
CLK3-203ENST00000454830 MT-ND6P03923 174 aa10.58□□□□□ -0.72
CLK3-203ENST00000454830 CDPF1Q6NVV7 123 aa10.58□□□□□ -0.72
CLK3-203ENST00000454830 PDE6HQ13956 83 aa10.57□□□□□ -0.72
CLK3-203ENST00000454830 HELZ2Q9BYK8 2649 aaKnown RBP10.57□□□□□ -0.72
CLK3-203ENST00000454830 TMEM136Q6ZRR5 245 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms