RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 LINC00477Q96M19 166 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 C9orf85Q96MD7 179 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 SLC25A2Q9BXI2 301 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 GFRA4Q9GZZ7 299 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 SIRPDQ9H106 197 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 JPT2Q9H910 190 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 EDA2RQ9HAV5 297 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 HHLA3Q9XRX5 114 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 TCF19Q9Y242 345 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 SELENOKQ9Y6D0 94 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 LTBP2Q14767 1821 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 TRBV6-6A0A0A6YYG2 114 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 LOC101059948A0A1B0GTJ6 334 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 MYMXA0A1B0GTQ4 84 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 UBE2L5PA0A1B0GUS4 154 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 A8MWV9 139 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 OOSP1A8MZH6 123 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 C4orf51C9J302 202 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 PRSS46E5RG02 174 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 NDUFC2-KCTD14E9PQ53 114 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 H0YIG0 161 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 TMEM178BH3BS89 294 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 SPRY3O43610 288 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1-39P01597 117 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1D-39P04432 117 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 GCHFRP30047 84 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 CXCL5P42830 114 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 CSN1S1P47710 185 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 SPINT3P49223 89 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 FOXA3P55318 350 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 FBXW4P57775 412 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 GNG5P63218 68 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 RPL18Q07020 188 aaKnown RBP2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 C4orf26Q17RF5 130 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 CENPWQ5EE01 88 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 C9orf153Q5TBE3 101 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 DUX4L9Q6RFH8 374 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 Q6ZR03 302 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF493Q6ZR52 646 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 FOXL2NBQ6ZUU3 175 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 C5orf38Q86SI9 138 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 RPS19BP1Q86WX3 136 aaKnown RBP2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 ANKRD29Q8N6D5 301 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 THAP8Q8NA92 274 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 FAM57AQ8TBR7 257 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 UPK3BQ9BT76 320 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 C16orf95Q9H693 158 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 NHP2Q9NX24 153 aaKnown RBP2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 PSENENQ9NZ42 101 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 C19orf25Q9UFG5 118 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 PYGO1Q9Y3Y4 419 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 U3KQK5 164 aa2.82□□□□□ -1.96
HMGB3P8-201ENST00000449709 LRRK1Q38SD2 2015 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 ARID1AO14497 2285 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGHV3OR15-7A0A075B7D8 119 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 A0A0U1RRA0 63 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF816-ZNF321PA0A0X1KG74 233 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 WI2-2373I1.2A0A1W2PRP0 233 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 RBAKDNA6NC62 111 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 LILRA5A6NI73 299 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 J3QQQ9 107 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 LGALS9O00182 355 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 CLDN14O95500 239 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 NPYP01303 97 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1-5P01602 117 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGHG2P01859 326 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 CD7P09564 240 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 CT62P0C5K7 136 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGHV4-30-4P0DP06 118 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 EMDP50402 254 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 EFNA4P52798 201 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 MFAP2P55001 183 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 BRWD1-AS2P59051 145 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 HERV-K104P61576 105 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 HBBP68871 147 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF415Q09FC8 603 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 MLF2Q15773 248 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 CST6Q15828 149 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 HRCT1Q6UXD1 115 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF818PQ6ZRF7 136 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 GOLT1AQ6ZVE7 132 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 IL17RELQ6ZVW7 336 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 C6orf201Q7Z4U5 140 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 DCAF4L2Q8NA75 395 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 PRSS3P2Q8NHM4 247 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 FGFBP3Q8TAT2 258 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 TIMD4Q96H15 378 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF488Q96MN9 340 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 TRGV9Q99603 122 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 SHANK2-AS3Q9BTD1 123 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 ARRDC1-AS1Q9H2J1 176 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 Q9H8V8 135 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF492Q9P255 531 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 PILRAQ9UKJ1 303 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 SPTBP11277 2137 aa2.81□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV2D-26A0A0A0MRZ7 120 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 CCL15-CCL14A0A0B4J2E2 113 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGLV5-39A0A0G2JS06 123 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 FAM236AA0A1B0GUQ0 79 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 FAM236BA0A1B0GV22 79 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 587.1 ms