RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CHRDL1Q9BU40 450 aa11.62□□□□□ -0.55
SF1-211ENST00000448404 PRORYQ9H606 182 aa11.62□□□□□ -0.55
SF1-211ENST00000448404 ARL2-SNX15V9GYD0 113 aa11.62□□□□□ -0.55
SF1-211ENST00000448404 SPATA45Q537H7 98 aa11.62□□□□□ -0.55
SF1-211ENST00000448404 Q6ZN92 141 aa11.62□□□□□ -0.55
SF1-211ENST00000448404 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
SF1-211ENST00000448404 RNF125Q96EQ8 232 aa11.62□□□□□ -0.55
SF1-211ENST00000448404 FBXL7Q9UJT9 491 aa11.62□□□□□ -0.55
SF1-211ENST00000448404 EGR2P11161 476 aaPredicted RBP11.61□□□□□ -0.55
SF1-211ENST00000448404 CEACAM3P40198 252 aa11.61□□□□□ -0.55
SF1-211ENST00000448404 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
SF1-211ENST00000448404 AJUBAQ96IF1 538 aa11.61□□□□□ -0.55
SF1-211ENST00000448404 SPOCK3Q9BQ16 436 aa11.61□□□□□ -0.55
SF1-211ENST00000448404 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
SF1-211ENST00000448404 DIRC3C9JPN6 131 aa11.61□□□□□ -0.55
SF1-211ENST00000448404 NDUFA3O95167 84 aa11.61□□□□□ -0.55
SF1-211ENST00000448404 SIRPDQ9H106 197 aa11.61□□□□□ -0.55
SF1-211ENST00000448404 MRPL27Q9P0M9 148 aaKnown RBP11.61□□□□□ -0.55
SF1-211ENST00000448404 IGHV7-81A0A0B4J1V7 117 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 ZNF785A8K8V0 405 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 M0R1W7 72 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 ZNF253O75346 499 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 NTF3P20783 257 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 LMO4P61968 165 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 UNQ5815/PRO19632Q6UWF5 114 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 ZNF207O43670 478 aaKnown RBP11.6□□□□□ -0.55
SF1-211ENST00000448404 PRB1P04280 392 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 HINT1P49773 126 aaPredicted RBP11.6□□□□□ -0.55
SF1-211ENST00000448404 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 SIGLECL1Q8N7X8 197 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 MBD6Q96DN6 1003 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 TPPP3Q9BW30 176 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 LAMTOR2Q9Y2Q5 125 aa11.6□□□□□ -0.55
SF1-211ENST00000448404 TMSB15BA0A087X1C1 80 aa11.59□□□□□ -0.55
SF1-211ENST00000448404 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
SF1-211ENST00000448404 PAX2Q02962 417 aa11.59□□□□□ -0.55
SF1-211ENST00000448404 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
SF1-211ENST00000448404 NPBQ8NG41 125 aa11.59□□□□□ -0.55
SF1-211ENST00000448404 GPR82Q96P67 336 aa11.59□□□□□ -0.55
SF1-211ENST00000448404 IGLV2-11P01706 119 aa11.59□□□□□ -0.55
SF1-211ENST00000448404 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
SF1-211ENST00000448404 GNB1LQ9BYB4 327 aa11.59□□□□□ -0.55
SF1-211ENST00000448404 IGLV11-55A0A075B6I3 123 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 IZUMO1RA6ND01 250 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 ATOH7Q8N100 152 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 Q8N9W7 124 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 ZNF331Q9NQX6 463 aaPredicted RBP11.58□□□□□ -0.56
SF1-211ENST00000448404 APCSP02743 223 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 GPR183P32249 361 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 EFNA4P52798 201 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 ZNF562Q6V9R5 426 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 ERASQ7Z444 233 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 OR4B1Q8NGF8 309 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 C8orf49Q96NF6 230 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 ALKBH7Q9BT30 221 aaPredicted RBP11.58□□□□□ -0.56
SF1-211ENST00000448404 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
SF1-211ENST00000448404 ATP6V0E1O15342 81 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 HLA-DRB1P01911 266 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 SHANK2-AS3Q9BTD1 123 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 RNF24Q9Y225 148 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 IGHV2-70DA0A0C4DH43 119 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 HIST1H1EP10412 219 aaKnown RBP11.57□□□□□ -0.56
SF1-211ENST00000448404 CDKN1BP46527 198 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 AMTP48728 403 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 ZNF138P52744 262 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 PLP1P60201 277 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 Q86TA4 180 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 Q8N976 141 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 Q8TAT8 98 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 ZC2HC1AQ96GY0 325 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 C21orf62Q9NYP8 219 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 UQCR10Q9UDW1 63 aa11.57□□□□□ -0.56
SF1-211ENST00000448404 TBL2Q9Y4P3 447 aaKnown RBP11.57□□□□□ -0.56
SF1-211ENST00000448404 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 IGKV2-40A0A087WW87 121 aaPredicted RBP11.56□□□□□ -0.56
SF1-211ENST00000448404 A0A1W2PS18 150 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 LTAP01374 205 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 IGKV2D-40P01614 121 aaPredicted RBP11.56□□□□□ -0.56
SF1-211ENST00000448404 S100A7P31151 101 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 UBE2V1Q13404 147 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 MAJINQ3KP22 176 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 Q8N6K4 173 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 ORAOV1Q8WV07 137 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 IGHV4-61A0A0C4DH41 118 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 CBY3A6NI87 242 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 H3BRN7 92 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 ANKRD17O75179 2603 aaKnown RBP11.56□□□□□ -0.56
SF1-211ENST00000448404 P01737 135 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 GPX1P07203 203 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 IGLC3P0DOY3 106 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 CTRLP40313 264 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 SIGLEC15Q6ZMC9 328 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 GRAMD2BQ96HH9 432 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 KLF12Q9Y4X4 402 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 NBPF19A0A087WUL8 3843 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 COL8A1P27658 744 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 LCN12Q6JVE5 192 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 RNF5Q99942 180 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms