RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SRIP30626 198 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 CCR2P41597 374 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 PSMD8P48556 350 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 CDC42P60953 191 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 DEFB103AP81534 67 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 DEFB134Q4QY38 66 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 PLEKHB2Q96CS7 222 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 DNAJC30Q96LL9 226 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 IMMP2LQ96T52 175 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 TM2D3Q9BRN9 247 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 SLC39A9Q9NUM3 307 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 MRPL16Q9NX20 251 aaKnown RBP2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 GINS2Q9Y248 185 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 HSPB11Q9Y547 144 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 FAM215AQ9Y5M1 114 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 NIPBLQ6KC79 2804 aaeCLIP2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 MTORP42345 2549 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 CACNA1DQ01668 2161 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 ATMQ13315 3056 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 PRORSD1PA6NEY8 169 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 H3BT86 120 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 J3QKU1 62 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 GNRH2O43555 120 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 CREBL2O60519 120 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 APOA2P02652 100 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 PRB1P04280 392 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 CSN2P05814 226 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 BPGMP07738 259 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 TPI1P60174 286 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 KISS1Q15726 138 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 PYDC2Q56P42 97 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 TMEM128Q5BJH2 165 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 BPIFA4PQ86YQ2 179 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 TMEM35BQ8NCS4 154 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 OR52R1Q8NGF1 315 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 OR10J5Q8NHC4 309 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 TERB2Q8NHR7 220 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 SKA2Q8WVK7 121 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 DNAJC9Q8WXX5 260 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 RMND5BQ96G75 393 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 NAT8Q9UHE5 227 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 SEC16AO15027 2179 aa2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 USP9YO00507 2555 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P48-201ENST00000446155 MGAQ8IWI9 3026 aa2.4□□□□□ -2.02
HMGB1P48-201ENST00000446155 ARAP2Q8WZ64 1704 aa2.4□□□□□ -2.02
HMGB1P48-201ENST00000446155 NYNRINQ9P2P1 1898 aaKnown RBP2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 TRGV5A0A0B4J1U4 118 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 DUXBA0A1W2PPF3 345 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 C1orf196B1AJZ1 125 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 E7EQ34 232 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 C5orf67F2Z3F1 127 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 CYB5BO43169 146 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 RPL28P46779 137 aaKnown RBP2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 EVX1P49640 407 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 FOXF1Q12946 379 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 SURF2Q15527 256 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 LTC4SQ16873 150 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 RRN3P1Q2M238 152 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 LINC01554Q52M75 96 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 PRR9Q5T870 116 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 SAMD13Q5VXD3 122 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 TOMM20LQ6UXN7 152 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 ZNF561Q8N587 486 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 NUP35Q8NFH5 326 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 EFCAB11Q9BUY7 163 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 ZNF471Q9BX82 626 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 TUBA4BQ9H853 241 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 TAS2R7Q9NYW3 318 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 MED11Q9P086 117 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 ERGIC3Q9Y282 383 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 TRPM6Q9BX84 2022 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 APC2O95996 2303 aa2.4□□□□□ -2.03
HMGB1P48-201ENST00000446155 PLXNB1O43157 2135 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 ZNF106Q9H2Y7 1883 aaKnown RBP2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 TLN1Q9Y490 2541 aaKnown RBP2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 PLXND1Q9Y4D7 1925 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 ACACAQ13085 2346 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 A0A0J9YX75 114 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 ZNF860A6NHJ4 632 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 PIAS1O75925 651 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 MSMBP08118 114 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 SCGB1A1P11684 91 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 PSMB8P28062 276 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 YPEL3P61236 119 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 S100A12P80511 92 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 IGFBP7Q16270 282 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 TRAPPC6BQ86SZ2 158 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 LHFPL1Q86WI0 220 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 CLVS1Q8IUQ0 354 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 DYNAPQ8N1N2 210 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 AIF1LQ9BQI0 150 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 LRTM1Q9HBL6 345 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 PCTPQ9UKL6 214 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 TIMM9Q9Y5J7 89 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 ECM29Q5VYK3 1845 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 GBF1Q92538 1859 aa2.39□□□□□ -2.03
HMGB1P48-201ENST00000446155 OTOGQ6ZRI0 2925 aa2.38□□□□□ -2.03
HMGB1P48-201ENST00000446155 PDZD2O15018 2839 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms