RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 M0R3E3 92 aa13.94□□□□□ -0.18
CLDN9-201ENST00000445369 IGHV3-23P01764 117 aa13.94□□□□□ -0.18
CLDN9-201ENST00000445369 FAM106CPP0CH98 169 aa13.94□□□□□ -0.18
CLDN9-201ENST00000445369 NTF3P20783 257 aa13.94□□□□□ -0.18
CLDN9-201ENST00000445369 FOXA3P55318 350 aaPredicted RBP13.94□□□□□ -0.18
CLDN9-201ENST00000445369 FAM120AOSQ5T036 256 aa13.94□□□□□ -0.18
CLDN9-201ENST00000445369 C1RLQ9NZP8 487 aa13.94□□□□□ -0.18
CLDN9-201ENST00000445369 SPTBN1Q01082 2364 aaKnown RBP13.93□□□□□ -0.18
CLDN9-201ENST00000445369 HSBP1O75506 76 aa13.93□□□□□ -0.18
CLDN9-201ENST00000445369 LMO4P61968 165 aa13.93□□□□□ -0.18
CLDN9-201ENST00000445369 PRR31Q5SQ13 230 aa13.93□□□□□ -0.18
CLDN9-201ENST00000445369 SNHG12Q9BXW3 62 aa13.93□□□□□ -0.18
CLDN9-201ENST00000445369 OR2T8A6NH00 312 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 HAX1O00165 279 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 CTSGP08311 255 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 UQCRFS1P47985 274 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 URB1-AS1Q96HZ7 61 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 BPESC1Q9GZL8 116 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 CACNA1AO00555 2505 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 C19orf84I3L1E1 186 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 BORCS7Q96B45 105 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 TXN2Q99757 166 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 ASCL2Q99929 193 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 MIEN1Q9BRT3 115 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 AAMDCQ9H7C9 122 aa13.92□□□□□ -0.18
CLDN9-201ENST00000445369 SCGB2A1O75556 95 aa13.91□□□□□ -0.18
CLDN9-201ENST00000445369 PRB4P10163 310 aaPredicted RBP13.91□□□□□ -0.18
CLDN9-201ENST00000445369 SAA4P35542 130 aa13.91□□□□□ -0.18
CLDN9-201ENST00000445369 RNASEKQ6P5S7 137 aaKnown RBP13.91□□□□□ -0.18
CLDN9-201ENST00000445369 FAM110DQ8TAY7 271 aaPredicted RBP13.91□□□□□ -0.18
CLDN9-201ENST00000445369 SH2D7A6NKC9 451 aaPredicted RBP13.91□□□□□ -0.18
CLDN9-201ENST00000445369 RAB4AP20338 218 aa13.91□□□□□ -0.18
CLDN9-201ENST00000445369 CRIP1P50238 77 aa13.91□□□□□ -0.18
CLDN9-201ENST00000445369 KLK9Q2XQG4 91 aa13.91□□□□□ -0.18
CLDN9-201ENST00000445369 KLK9Q9UKQ9 250 aa13.91□□□□□ -0.18
CLDN9-201ENST00000445369 SERTM2A0A1B0GWG4 89 aa13.9□□□□□ -0.18
CLDN9-201ENST00000445369 RPL7P18124 248 aaKnown RBP13.9□□□□□ -0.18
CLDN9-201ENST00000445369 CTRLP40313 264 aa13.9□□□□□ -0.18
CLDN9-201ENST00000445369 PSG9Q00887 426 aa13.9□□□□□ -0.18
CLDN9-201ENST00000445369 LOC102724200A0A096LPH7 203 aaPredicted RBP13.89□□□□□ -0.19
CLDN9-201ENST00000445369 FAM181BA6NEQ2 426 aa13.89□□□□□ -0.19
CLDN9-201ENST00000445369 M0R143 59 aa13.89□□□□□ -0.19
CLDN9-201ENST00000445369 M0R2Z0 102 aa13.89□□□□□ -0.19
CLDN9-201ENST00000445369 CHEK1O14757 476 aa13.89□□□□□ -0.19
CLDN9-201ENST00000445369 LPAR2Q9HBW0 351 aa13.89□□□□□ -0.19
CLDN9-201ENST00000445369 FAM162BQ5T6X4 162 aa13.89□□□□□ -0.19
CLDN9-201ENST00000445369 ZNF705AQ6ZN79 300 aaPredicted RBP13.89□□□□□ -0.19
CLDN9-201ENST00000445369 C8orf49Q96NF6 230 aa13.89□□□□□ -0.19
CLDN9-201ENST00000445369 RABAC1Q9UI14 185 aa13.89□□□□□ -0.19
CLDN9-201ENST00000445369 ATP6V0E1O15342 81 aa13.88□□□□□ -0.19
CLDN9-201ENST00000445369 GNLYP22749 145 aa13.88□□□□□ -0.19
CLDN9-201ENST00000445369 MRPL52Q86TS9 123 aaKnown RBP13.88□□□□□ -0.19
CLDN9-201ENST00000445369 ARL6IP6Q8N6S5 226 aa13.88□□□□□ -0.19
CLDN9-201ENST00000445369 GATD1Q8NB37 220 aa13.88□□□□□ -0.19
CLDN9-201ENST00000445369 ZNF502Q8TBZ5 544 aa13.88□□□□□ -0.19
CLDN9-201ENST00000445369 NDFIP1Q9BT67 221 aa13.88□□□□□ -0.19
CLDN9-201ENST00000445369 CSMD1Q96PZ7 3565 aa13.88□□□□□ -0.19
CLDN9-201ENST00000445369 A0A1B0GUT8 65 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 CSN1S1P47710 185 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 ECSCRQ19T08 205 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 EBLN2Q6P2I7 272 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 UNQ5815/PRO19632Q6UWF5 114 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 TMUB1Q9BVT8 246 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 ITPR1Q14643 2758 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 ARMS2P0C7Q2 107 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 SMAD5-AS1Q9Y6J3 95 aa13.87□□□□□ -0.19
CLDN9-201ENST00000445369 MED13LQ71F56 2210 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 C2orf70A6NJV1 201 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 NPFFO15130 113 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 C15orf32Q32M92 178 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 SPATA45Q537H7 98 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 CHCHD1Q96BP2 118 aaKnown RBP13.86□□□□□ -0.19
CLDN9-201ENST00000445369 CENPVL3A0A0U1RRI6 287 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 M0QZ24 198 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 RNF224P0DH78 156 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 CT45A10P0DMU9 189 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 RIGQ13278 110 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 Q6AWC8 147 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 COX8CQ7Z4L0 72 aa13.86□□□□□ -0.19
CLDN9-201ENST00000445369 IGKV2-40A0A087WW87 121 aaPredicted RBP13.85□□□□□ -0.19
CLDN9-201ENST00000445369 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.85□□□□□ -0.19
CLDN9-201ENST00000445369 TMEM8BA6NDV4 472 aa13.85□□□□□ -0.19
CLDN9-201ENST00000445369 IGKV2D-40P01614 121 aaPredicted RBP13.85□□□□□ -0.19
CLDN9-201ENST00000445369 GPR183P32249 361 aa13.85□□□□□ -0.19
CLDN9-201ENST00000445369 NUTF2P61970 127 aaKnown RBP13.85□□□□□ -0.19
CLDN9-201ENST00000445369 RHOGP84095 191 aa13.85□□□□□ -0.19
CLDN9-201ENST00000445369 ZFAND3Q9H8U3 227 aa13.85□□□□□ -0.19
CLDN9-201ENST00000445369 A0A1B0GW15 77 aa13.84□□□□□ -0.19
CLDN9-201ENST00000445369 BTF3P20290 206 aaKnown RBP13.84□□□□□ -0.19
CLDN9-201ENST00000445369 LCN12Q6JVE5 192 aa13.84□□□□□ -0.19
CLDN9-201ENST00000445369 IGHV4-39P01824 125 aa13.84□□□□□ -0.19
CLDN9-201ENST00000445369 IGHG4P01861 327 aa13.84□□□□□ -0.19
CLDN9-201ENST00000445369 S100A7P31151 101 aa13.84□□□□□ -0.19
CLDN9-201ENST00000445369 PMCHL1Q16048 86 aa13.84□□□□□ -0.19
CLDN9-201ENST00000445369 IGHV1-24A0A0C4DH33 117 aa13.83□□□□□ -0.2
CLDN9-201ENST00000445369 FBLL1A6NHQ2 334 aaKnown RBP13.83□□□□□ -0.2
CLDN9-201ENST00000445369 IGHV3OR16-8A0A075B7F1 116 aa13.83□□□□□ -0.2
CLDN9-201ENST00000445369 IGHV3-35A0A0C4DH35 117 aa13.83□□□□□ -0.2
CLDN9-201ENST00000445369 SH2D1AO60880 128 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms