RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TMPRSS5Q9H3S3 457 aa9.81□□□□□ -0.84
HMGN1-208ENST00000443046 PPP1R14DQ9NXH3 145 aa9.81□□□□□ -0.84
HMGN1-208ENST00000443046 IFNA5P01569 189 aa9.8□□□□□ -0.84
HMGN1-208ENST00000443046 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
HMGN1-208ENST00000443046 PLP1P60201 277 aa9.8□□□□□ -0.84
HMGN1-208ENST00000443046 DAZ2Q13117 558 aaKnown RBP9.8□□□□□ -0.84
HMGN1-208ENST00000443046 OR51S1Q8NGJ8 323 aa9.8□□□□□ -0.84
HMGN1-208ENST00000443046 RPUSD4Q96CM3 377 aaKnown RBP9.8□□□□□ -0.84
HMGN1-208ENST00000443046 A0A087WXM4 84 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 FAM229AH3BQW9 127 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 MRPS12O15235 138 aaKnown RBP9.79□□□□□ -0.84
HMGN1-208ENST00000443046 AKAIN1P0CW23 69 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 PRB4P10163 310 aaPredicted RBP9.79□□□□□ -0.84
HMGN1-208ENST00000443046 IAPPP10997 89 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 MRPS10P82664 201 aaKnown RBP9.79□□□□□ -0.84
HMGN1-208ENST00000443046 GFI1BQ5VTD9 330 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 ACOT7LQ6ZUV0 252 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 NFE4Q86UQ8 179 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 CCDC28AQ8IWP9 274 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 SMIM4Q8WVI0 70 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 AP3S1Q92572 193 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 MIXL1Q9H2W2 232 aa9.79□□□□□ -0.84
HMGN1-208ENST00000443046 SNURFLB1AK76 121 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 NXPH4O95158 308 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 SLC25A6P12236 298 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 GCSHP23434 173 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 SRPXP78539 464 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 Q6ZSN1 163 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 Q6ZTI0 123 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 VCX3AQ9NNX9 186 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 HIGD1AQ9Y241 93 aa9.78□□□□□ -0.84
HMGN1-208ENST00000443046 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.85
HMGN1-208ENST00000443046 DUXBA0A1W2PPF3 345 aa9.77□□□□□ -0.85
HMGN1-208ENST00000443046 J3QL48 77 aa9.77□□□□□ -0.85
HMGN1-208ENST00000443046 C4orf46Q504U0 113 aa9.77□□□□□ -0.85
HMGN1-208ENST00000443046 TMED4Q7Z7H5 227 aa9.77□□□□□ -0.85
HMGN1-208ENST00000443046 CLVS1Q8IUQ0 354 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-208ENST00000443046 PARD6GQ9BYG4 376 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-208ENST00000443046 PAIP2BQ9ULR5 123 aaKnown RBP9.77□□□□□ -0.85
HMGN1-208ENST00000443046 CTDSPLO15194 276 aa9.76□□□□□ -0.85
HMGN1-208ENST00000443046 HYPMO75409 117 aa9.76□□□□□ -0.85
HMGN1-208ENST00000443046 CXCL2P19875 107 aa9.76□□□□□ -0.85
HMGN1-208ENST00000443046 RAP2BP61225 183 aa9.76□□□□□ -0.85
HMGN1-208ENST00000443046 RPP30P78346 268 aaKnown RBP9.76□□□□□ -0.85
HMGN1-208ENST00000443046 CTF1Q16619 201 aa9.76□□□□□ -0.85
HMGN1-208ENST00000443046 PATE2Q6UY27 113 aa9.76□□□□□ -0.85
HMGN1-208ENST00000443046 CYP2G1PQ6ZSU1 146 aa9.76□□□□□ -0.85
HMGN1-208ENST00000443046 SCGB3A2Q96PL1 93 aa9.76□□□□□ -0.85
HMGN1-208ENST00000443046 CIB3Q96Q77 187 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-208ENST00000443046 ZNF331Q9NQX6 463 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-208ENST00000443046 PIGBOS1A0A0B4J2F0 54 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 ANKRD20A5PA0PJZ0 165 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 KRTAP29-1A8MX34 341 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-208ENST00000443046 PRAC2D3DTV9 90 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 SYNGR2O43760 224 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 MED6O75586 246 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 IL5P05113 134 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 ANXA3P12429 323 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 AKR1C1Q04828 323 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 LRTM2Q8N967 370 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 ZBTB8BQ8NAP8 495 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-208ENST00000443046 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 TMEM70Q9BUB7 260 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 SCP2D1Q9UJQ7 156 aa9.75□□□□□ -0.85
HMGN1-208ENST00000443046 PMS2P5A8MQ11 134 aa9.74□□□□□ -0.85
HMGN1-208ENST00000443046 ZNF324O75467 553 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-208ENST00000443046 LINC00869P0C866 280 aa9.74□□□□□ -0.85
HMGN1-208ENST00000443046 HAMPP81172 84 aa9.74□□□□□ -0.85
HMGN1-208ENST00000443046 LYPD5Q6UWN5 251 aa9.74□□□□□ -0.85
HMGN1-208ENST00000443046 LRRC20Q8TCA0 184 aa9.74□□□□□ -0.85
HMGN1-208ENST00000443046 ZNF431Q8TF32 576 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-208ENST00000443046 ODF3Q96PU9 254 aa9.74□□□□□ -0.85
HMGN1-208ENST00000443046 PYGO2Q9BRQ0 406 aa9.74□□□□□ -0.85
HMGN1-208ENST00000443046 NAA50Q9GZZ1 169 aaKnown RBP9.74□□□□□ -0.85
HMGN1-208ENST00000443046 K7EP13 123 aa9.73□□□□□ -0.85
HMGN1-208ENST00000443046 WRBO00258 174 aa9.73□□□□□ -0.85
HMGN1-208ENST00000443046 CTDSP2O14595 271 aa9.73□□□□□ -0.85
HMGN1-208ENST00000443046 OR5G3P0C626 314 aa9.73□□□□□ -0.85
HMGN1-208ENST00000443046 SELENOTP62341 195 aa9.73□□□□□ -0.85
HMGN1-208ENST00000443046 SPANXN5Q5MJ07 72 aa9.73□□□□□ -0.85
HMGN1-208ENST00000443046 LCN15Q6UWW0 184 aa9.73□□□□□ -0.85
HMGN1-208ENST00000443046 SLC50A1Q9BRV3 221 aa9.73□□□□□ -0.85
HMGN1-208ENST00000443046 TRGV2A0A075B6R0 118 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 TRAV12-3A0A0B4J271 114 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 LINC00854A0A1B0GVQ3 168 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 K7EPK0 472 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 CT45A10P0DMU9 189 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 TEPPQ6URK8 271 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 LINC00467Q9BRT7 94 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 MSRB1Q9NZV6 116 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
HMGN1-208ENST00000443046 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 SLC17A3O00476 420 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 SPINK4O60575 86 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 S100A7AQ86SG5 101 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 CCDC190Q86UF4 302 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 ARL6Q9H0F7 186 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 GSN-AS1Q9NRJ2 163 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 RNF24Q9Y225 148 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms