RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 WDR31Q8NA23 367 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 RNF183Q96D59 192 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 SPANXB1Q9NS25 103 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-214ENST00000441542 LOC107984156A0A0G2JMH3 177 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 C19orf67A6NJJ6 358 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 MT-ATP8P03928 68 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 ARL17AQ8IVW1 177 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 DEFB104AQ8WTQ1 72 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 TMEM14BQ9NUH8 114 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 PRNDQ9UKY0 176 aa6.04□□□□□ -1.44
HDAC9-214ENST00000441542 TRGV8A0A0C4DH27 118 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 NPIPB6E9PJ23 425 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 H3BVH4 76 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 APOMO95445 188 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 RIGQ13278 110 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 C3orf36Q3SXR2 165 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 GAGE13Q4V321 117 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 ZNF766Q5HY98 468 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 OR4X2Q8NGF9 303 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 FOXC2Q99958 501 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 RPUSD1Q9UJJ7 312 aaKnown RBP6.03□□□□□ -1.44
HDAC9-214ENST00000441542 FOXA2Q9Y261 457 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-214ENST00000441542 IGKV1D-17A0A075B6S4 117 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 B5MCH6 92 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 M0R3E3 92 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 UPK2O00526 184 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 TCRAP04437 139 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 SMIM17P0DL12 118 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 PRCDQ00LT1 54 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 TCTEX1D4Q5JR98 221 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 C17orf77Q96MU5 243 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 HIST1H4GQ99525 98 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 CXXC4Q9H2H0 198 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 RALYQ9UKM9 306 aaKnown RBP6.03□□□□□ -1.44
HDAC9-214ENST00000441542 DMXL1Q9Y485 3027 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 NCKAP5O14513 1909 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 CKS2P33552 79 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 RPL32P62910 135 aaKnown RBP6.03□□□□□ -1.44
HDAC9-214ENST00000441542 TMEM178AQ8NBL3 297 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 OR9G4Q8NGQ1 327 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 NDFIP1Q9BT67 221 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 MRPL32Q9BYC8 188 aaKnown RBP6.03□□□□□ -1.44
HDAC9-214ENST00000441542 KLK15Q9H2R5 256 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 C7orf69Q9H7B7 122 aa6.03□□□□□ -1.44
HDAC9-214ENST00000441542 TCRBV4S1A1TA0A5B7 111 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 PRRG2O14669 202 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 SS18L1O75177 396 aaPredicted RBP6.02□□□□□ -1.45
HDAC9-214ENST00000441542 OR5AN1Q8NGI8 311 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 MRAP2Q96G30 205 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 CCL13Q99616 98 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 MRPL20Q9BYC9 149 aaKnown RBP6.02□□□□□ -1.45
HDAC9-214ENST00000441542 JPT1Q9UK76 154 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 NCOR2Q9Y618 2525 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 A0A096LNJ9 63 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 IGLV3-19P01714 112 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 RBP4P02753 201 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 DLX1P56177 255 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 SEC61GP60059 68 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 SRSF1Q07955 248 aaKnown RBP eCLIP6.02□□□□□ -1.45
HDAC9-214ENST00000441542 ZC2HC1BQ5TFG8 222 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 OSR1Q8TAX0 266 aaPredicted RBP6.02□□□□□ -1.45
HDAC9-214ENST00000441542 TTTY12Q9BZ98 90 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 LINC00470Q9BZP3 86 aa6.02□□□□□ -1.45
HDAC9-214ENST00000441542 CFAP47Q6ZTR5 3102 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 MED13Q9UHV7 2174 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 C16orf97H3BN30 126 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 NDUFA3O95167 84 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 GAS8-AS1O95177 125 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 NPYP01303 97 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 GATA1P15976 413 aaPredicted RBP6.01□□□□□ -1.45
HDAC9-214ENST00000441542 LOXL3P58215 753 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 DIAPH2-AS1Q14236 149 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 TWIST1Q15672 202 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 LPAL2Q16609 132 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 LYZL1Q6UWQ5 148 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 FAM216BQ8N7L0 139 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 C3orf56Q8N813 242 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 C1orf43Q9BWL3 253 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 TPSG1Q9NRR2 321 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 IGHV3OR16-8A0A075B7F1 116 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 IGLL5B9A064 214 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 NDUFS7O75251 213 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 HBDP02042 147 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 LEPP41159 167 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 PSMB2P49721 201 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 WT1-ASQ06250 92 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 Q86TA4 180 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 RPRMLQ8N4K4 120 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 C8orf49Q96NF6 230 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 AGRNO00468 2067 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 TRBV25-1A0A075B6N4 114 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 FAM90A27PA6NNH2 459 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 PATE3B3GLJ2 98 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 IGFL4Q6B9Z1 124 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 ANAPC13Q9BS18 74 aa6.01□□□□□ -1.45
HDAC9-214ENST00000441542 MED13LQ71F56 2210 aa6□□□□□ -1.45
HDAC9-214ENST00000441542 IGKV3D-15A0A087WSY6 115 aa6□□□□□ -1.45
HDAC9-214ENST00000441542 LINC01548A6NM66 108 aa6□□□□□ -1.45
HDAC9-214ENST00000441542 IGHV1-2P23083 117 aa6□□□□□ -1.45
HDAC9-214ENST00000441542 CR1LQ2VPA4 569 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms