RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 CHD3Q12873 2000 aaKnown RBP0.52□□□□□ -2.33
PFDN4-202ENST00000441080 ZNF462Q96JM2 2506 aa0.52□□□□□ -2.33
PFDN4-202ENST00000441080 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 A0A0D9SG42 100 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 hDV103S1A0JD37 113 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 RIIAD1A6NNX1 92 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 ATP5HO75947 161 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 ATG12O94817 140 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 IFNA14P01570 189 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 IFNA4P05014 189 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 PHBP35232 272 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 VBP1P61758 197 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 HACD4Q5VWC8 232 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 DHRS4L2Q6PKH6 230 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 PLXNA4Q9HCM2 1894 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 SSR3Q9UNL2 185 aa0.51□□□□□ -2.33
PFDN4-202ENST00000441080 FREM3P0C091 2139 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 PHRF1Q9P1Y6 1649 aaKnown RBP0.5□□□□□ -2.33
PFDN4-202ENST00000441080 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 K7EIL1 84 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 RER1O15258 196 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 PRH1P02810 166 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 TRGC2P03986 189 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 OGNP20774 298 aaKnown RBP0.5□□□□□ -2.33
PFDN4-202ENST00000441080 SNCBQ16143 134 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 GPX7Q96SL4 187 aaPredicted RBP0.5□□□□□ -2.33
PFDN4-202ENST00000441080 MAP1LC3BQ9GZQ8 125 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 TET1Q8NFU7 2136 aa0.5□□□□□ -2.33
PFDN4-202ENST00000441080 K7ERJ3 54 aa0.49□□□□□ -2.33
PFDN4-202ENST00000441080 APOA2P02652 100 aa0.49□□□□□ -2.33
PFDN4-202ENST00000441080 EIF3IQ13347 325 aaKnown RBP0.49□□□□□ -2.33
PFDN4-202ENST00000441080 SH3BGRL3Q9H299 93 aa0.49□□□□□ -2.33
PFDN4-202ENST00000441080 LYRM2Q9NU23 88 aaPredicted RBP0.49□□□□□ -2.33
PFDN4-202ENST00000441080 MGAMO43451 1857 aa0.48□□□□□ -2.33
PFDN4-202ENST00000441080 C9orf170A2RU37 121 aa0.48□□□□□ -2.33
PFDN4-202ENST00000441080 CD14P08571 375 aa0.48□□□□□ -2.33
PFDN4-202ENST00000441080 FOXA3P55318 350 aaPredicted RBP0.48□□□□□ -2.33
PFDN4-202ENST00000441080 CIRBPQ14011 172 aaKnown RBP0.48□□□□□ -2.33
PFDN4-202ENST00000441080 MSMO1Q15800 293 aa0.48□□□□□ -2.33
PFDN4-202ENST00000441080 PBDC1Q9BVG4 233 aa0.48□□□□□ -2.33
PFDN4-202ENST00000441080 ASB4Q9Y574 426 aa0.48□□□□□ -2.33
PFDN4-202ENST00000441080 DOCK4Q8N1I0 1966 aa0.48□□□□□ -2.33
PFDN4-202ENST00000441080 SIP14410 1827 aa0.48□□□□□ -2.33
PFDN4-202ENST00000441080 UHRF1BP1Q6BDS2 1440 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 A0A096LPI6 279 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 TRAV5A0A0B4J249 113 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 TRBV30A0A0K0K1B3 111 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 ODAMA1E959 279 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 NUPR2A6NF83 97 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 C5orf67F2Z3F1 127 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 LYRM1O43325 122 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 HIST1H2BKO60814 126 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 HIST1H2BJP06899 126 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 ARF6P62330 175 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 ATOH7Q8N100 152 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 SMR3AQ99954 134 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 RNF11Q9Y3C5 154 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 MYO5AQ9Y4I1 1855 aaKnown RBP0.47□□□□□ -2.33
PFDN4-202ENST00000441080 NUP98P52948 1817 aa0.47□□□□□ -2.33
PFDN4-202ENST00000441080 MUC4Q99102 2169 aa0.46□□□□□ -2.34
PFDN4-202ENST00000441080 FXYD4P59646 89 aa0.46□□□□□ -2.34
PFDN4-202ENST00000441080 MALSU1Q96EH3 234 aa0.46□□□□□ -2.34
PFDN4-202ENST00000441080 SS18L2Q9UHA2 77 aa0.46□□□□□ -2.34
PFDN4-202ENST00000441080 USP24Q9UPU5 2620 aa0.46□□□□□ -2.34
PFDN4-202ENST00000441080 IFNA1P01562 189 aa0.45□□□□□ -2.34
PFDN4-202ENST00000441080 IDO1P14902 403 aa0.45□□□□□ -2.34
PFDN4-202ENST00000441080 PPP1R2P41236 205 aa0.45□□□□□ -2.34
PFDN4-202ENST00000441080 MRPS15P82914 257 aaKnown RBP0.45□□□□□ -2.34
PFDN4-202ENST00000441080 OR13C6PQ8NH95 151 aa0.45□□□□□ -2.34
PFDN4-202ENST00000441080 GINS3Q9BRX5 216 aa0.45□□□□□ -2.34
PFDN4-202ENST00000441080 PTPRFP10586 1907 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 ZNF727A8MUV8 499 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 SPINT3P49223 89 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 SPINK7P58062 85 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 MIR22HGQ0VDD5 57 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 OCIAD2Q56VL3 154 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 C1orf140Q5VVS0 124 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 Q6ZS92 163 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 PLAC8Q9NZF1 115 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 SYNE2Q8WXH0 6885 aaKnown RBP0.44□□□□□ -2.34
PFDN4-202ENST00000441080 CAMSAP1Q5T5Y3 1602 aa0.44□□□□□ -2.34
PFDN4-202ENST00000441080 GPR31O00270 319 aa0.43□□□□□ -2.34
PFDN4-202ENST00000441080 KDELR1P24390 212 aa0.43□□□□□ -2.34
PFDN4-202ENST00000441080 ZNF137PP52743 207 aa0.43□□□□□ -2.34
PFDN4-202ENST00000441080 HBBP68871 147 aa0.43□□□□□ -2.34
PFDN4-202ENST00000441080 FOXI2Q6ZQN5 318 aa0.43□□□□□ -2.34
PFDN4-202ENST00000441080 FAM216BQ8N7L0 139 aa0.43□□□□□ -2.34
PFDN4-202ENST00000441080 BOKQ9UMX3 212 aaPredicted RBP0.43□□□□□ -2.34
PFDN4-202ENST00000441080 BCL9O00512 1426 aa0.43□□□□□ -2.34
PFDN4-202ENST00000441080 NAV3Q8IVL0 2385 aa0.43□□□□□ -2.34
PFDN4-202ENST00000441080 APCP25054 2843 aa0.42□□□□□ -2.34
PFDN4-202ENST00000441080 ERBINQ96RT1 1412 aa0.42□□□□□ -2.34
PFDN4-202ENST00000441080 IGHV3-33P01772 117 aa0.42□□□□□ -2.34
PFDN4-202ENST00000441080 RPL19P84098 196 aaKnown RBP0.42□□□□□ -2.34
PFDN4-202ENST00000441080 C6orf52Q5T4I8 152 aa0.42□□□□□ -2.34
PFDN4-202ENST00000441080 NUP35Q8NFH5 326 aa0.42□□□□□ -2.34
PFDN4-202ENST00000441080 COL24A1Q17RW2 1714 aa0.41□□□□□ -2.34
PFDN4-202ENST00000441080 Q6ZQY7 126 aa0.41□□□□□ -2.34
PFDN4-202ENST00000441080 LINC00299Q6ZSB3 139 aa0.41□□□□□ -2.34
PFDN4-202ENST00000441080 PHF5AQ7RTV0 110 aaKnown RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms