RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 MBNL2Q5VZF2 373 aaKnown RBP12.74□□□□□ -0.37
DHFR-201ENST00000439211 IGKV1-16P04430 117 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 PLGLAQ15195 96 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 OR5AN1Q8NGI8 311 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
DHFR-201ENST00000439211 UTF1Q5T230 341 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 C10orf113Q5VZT2 155 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 Q6ZUT4 128 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 GTSCR1Q86UQ5 136 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 Q8TCH9 128 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 GTSF1Q8WW33 167 aa12.73□□□□□ -0.37
DHFR-201ENST00000439211 ZNF71Q9NQZ8 489 aaPredicted RBP12.73□□□□□ -0.37
DHFR-201ENST00000439211 A0A1B0GUT8 65 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 IGLL5B9A064 214 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 IGLV2-8P01709 118 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 P0C879 139 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 C1orf162Q8NEQ5 155 aaPredicted RBP12.72□□□□□ -0.37
DHFR-201ENST00000439211 TMEM160Q9NX00 188 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 SOX21Q9Y651 276 aaPredicted RBP12.72□□□□□ -0.37
DHFR-201ENST00000439211 COL6A6A6NMZ7 2263 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 SUB1P53999 127 aaKnown RBP eCLIP12.72□□□□□ -0.37
DHFR-201ENST00000439211 FOXI1Q12951 378 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 PGPEP1Q9NXJ5 209 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 NPIPB6E9PJ23 425 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 GLRXP35754 106 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 HCP5Q6MZN7 132 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 PRNTQ86SH4 94 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 NPIPB3Q92617 1050 aa12.72□□□□□ -0.37
DHFR-201ENST00000439211 CT45A10P0DMU9 189 aa12.71□□□□□ -0.37
DHFR-201ENST00000439211 CCL3L1P16619 93 aa12.71□□□□□ -0.37
DHFR-201ENST00000439211 FAM90A1Q86YD7 464 aa12.71□□□□□ -0.37
DHFR-201ENST00000439211 TSPAN13O95857 204 aa12.71□□□□□ -0.37
DHFR-201ENST00000439211 PRTN3P24158 256 aa12.71□□□□□ -0.37
DHFR-201ENST00000439211 KLRD1Q13241 179 aa12.71□□□□□ -0.37
DHFR-201ENST00000439211 OR1L4Q8NGR5 311 aa12.71□□□□□ -0.37
DHFR-201ENST00000439211 OR1L8Q8NGR8 309 aa12.71□□□□□ -0.37
DHFR-201ENST00000439211 ZNF502Q8TBZ5 544 aa12.71□□□□□ -0.38
DHFR-201ENST00000439211 TRAV8-2A0A0B4J237 113 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 TCRBV4S1A1TA0A5B7 111 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 TNFRSF1AP19438 455 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 ID1P41134 155 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 RPRMLQ8N4K4 120 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 UBTD1Q9HAC8 227 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 J3KRW8 73 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 SAA1P0DJI8 122 aaPredicted RBP12.7□□□□□ -0.38
DHFR-201ENST00000439211 PRB3Q04118 309 aaPredicted RBP12.7□□□□□ -0.38
DHFR-201ENST00000439211 C10orf55Q5SWW7 151 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 HBDP02042 147 aa12.7□□□□□ -0.38
DHFR-201ENST00000439211 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
DHFR-201ENST00000439211 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
DHFR-201ENST00000439211 Q8N7P7 452 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 LTAP01374 205 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 MRPL20Q9BYC9 149 aaKnown RBP12.69□□□□□ -0.38
DHFR-201ENST00000439211 XGP55808 180 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 LOXL3P58215 753 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 C3orf56Q8N813 242 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.69□□□□□ -0.38
DHFR-201ENST00000439211 IGF2BP2-AS1Q96M15 143 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 SLC25A33Q9BSK2 321 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 DKK2Q9UBU2 259 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 SLC25A15Q9Y619 301 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 OTOGLQ3ZCN5 2332 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 CKS2P33552 79 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 LGALS9CQ6DKI2 356 aa12.69□□□□□ -0.38
DHFR-201ENST00000439211 NDUFB3O43676 98 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 SCGB1D4Q6XE38 83 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 MUC3AQ02505 3323 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 UPK2O00526 184 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 IGHG3P01860 377 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 MALRD1Q5VYJ5 2156 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 FAM90A9PA6NNJ1 464 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 MOSP00540 346 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 LYRM7Q5U5X0 104 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 PTH2Q96A98 100 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
DHFR-201ENST00000439211 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 DLX4Q92988 240 aaPredicted RBP12.67□□□□□ -0.38
DHFR-201ENST00000439211 FOXC2Q99958 501 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 FOXA2Q9Y261 457 aaPredicted RBP12.67□□□□□ -0.38
DHFR-201ENST00000439211 DSCAML1Q8TD84 2053 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 TMEM262E9PQX1 116 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 ZC2HC1BQ5TFG8 222 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 CEND1Q8N111 149 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 RPEQ96AT9 228 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 ABHD17AQ96GS6 310 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 NAV3Q8IVL0 2385 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 FGF6P10767 208 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 EIF4EBP1Q13541 118 aaPredicted RBP12.67□□□□□ -0.38
DHFR-201ENST00000439211 ZNF714Q96N38 554 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 FAM110AQ9BQ89 295 aa12.67□□□□□ -0.38
DHFR-201ENST00000439211 TRGV8A0A0C4DH27 118 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 PRCDQ00LT1 54 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 DMDP11532 3685 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 D6R8Y8 96 aa12.66□□□□□ -0.38
DHFR-201ENST00000439211 HOXA3O43365 443 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms