RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 ACTR3CQ9C0K3 210 aaPredicted RBP4.77□□□□□ -1.65
SPEN-202ENST00000438066 BPESC1Q9GZL8 116 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 GNG13Q9P2W3 67 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 DPM3Q9P2X0 92 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 PXMP4Q9Y6I8 212 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 ABCA12Q86UK0 2595 aa4.77□□□□□ -1.65
SPEN-202ENST00000438066 TENM4Q6N022 2769 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.76□□□□□ -1.656e-12■■■■■ 34.3
SPEN-202ENST00000438066 SOCS3O14543 225 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 NUPL2O15504 423 aaKnown RBP4.76□□□□□ -1.65
SPEN-202ENST00000438066 NDUFS6O75380 124 aaKnown RBP4.76□□□□□ -1.65
SPEN-202ENST00000438066 EIF3GO75821 320 aaKnown RBP eCLIP4.76□□□□□ -1.65
SPEN-202ENST00000438066 TSPAN13O95857 204 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 OR13C7P0DN81 318 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 RPL29P47914 159 aaKnown RBP4.76□□□□□ -1.65
SPEN-202ENST00000438066 CDC34P49427 236 aaPredicted RBP4.76□□□□□ -1.65
SPEN-202ENST00000438066 LCN2P80188 198 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 ERHP84090 104 aaKnown RBP4.76□□□□□ -1.65
SPEN-202ENST00000438066 OR5I1Q13606 314 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 SOHLH1Q5JUK2 328 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 MIC13Q5XKP0 118 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 UFSP1Q6NVU6 142 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 VMO1Q7Z5L0 202 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 TMEM144Q7Z5S9 345 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 PPP1R27Q86WC6 154 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 CBLN2Q8IUK8 224 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 RNASEH2CQ8TDP1 164 aaKnown RBP4.76□□□□□ -1.65
SPEN-202ENST00000438066 RXFP4Q8TDU9 374 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 CACNG8Q8WXS5 425 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 NOL4LQ96MY1 436 aaPredicted RBP4.76□□□□□ -1.65
SPEN-202ENST00000438066 P2RX4Q99571 388 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 SLC39A9Q9NUM3 307 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 ABCA1O95477 2261 aa4.76□□□□□ -1.65
SPEN-202ENST00000438066 CELSR1Q9NYQ6 3014 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 ZFP92A6NM28 416 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 IFITM10A6NMD0 228 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 OOSP1A8MZH6 123 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 HMGB3O15347 200 aaKnown RBP4.75□□□□□ -1.65
SPEN-202ENST00000438066 CYB5BO43169 146 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 NDUFA3O95167 84 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 IFNA1P01562 189 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 FBP1P09467 338 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 LINC00869P0C866 280 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 RBMY1CP0DJD4 496 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 GPX4P36969 197 aaPredicted RBP4.75□□□□□ -1.65
SPEN-202ENST00000438066 RPL27AP46776 148 aaKnown RBP4.75□□□□□ -1.65
SPEN-202ENST00000438066 B2MP61769 119 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 MEF2BQ02080 365 aaPredicted RBP4.75□□□□□ -1.65
SPEN-202ENST00000438066 MINOS1Q5TGZ0 78 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 SLC16A13Q7RTY0 426 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 CCL19Q99731 98 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 MANBALQ9NQG1 85 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 METTL1Q9UBP6 276 aaKnown RBP4.75□□□□□ -1.65
SPEN-202ENST00000438066 VAX2Q9UIW0 290 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 MINOS1-NBL1R4GNA1 71 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 ZANQ9Y493 2812 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 A0A1B0GWB2 263 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 J3QKU1 62 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 CRYGCP07315 174 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 CFC1BP0CG36 223 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 CFC1P0CG37 223 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 STAG3L2P0CL84 134 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 PAX6P26367 422 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 SUB1P53999 127 aaKnown RBP eCLIP4.75□□□□□ -1.65
SPEN-202ENST00000438066 RAB31Q13636 194 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 RHEBQ15382 184 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 TNXAQ16473 311 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 DYNAPQ8N1N2 210 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 Q8N6K4 173 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 NPBQ8NG41 125 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 C10orf105Q8TEF2 133 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 FBXL15Q9H469 300 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 HILPDAQ9Y5L2 63 aa4.75□□□□□ -1.65
SPEN-202ENST00000438066 VPS13CQ709C8 3753 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 A0A1W2PPV4 95 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 C7orf77A4D0Y5 90 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 PSMB11A5LHX3 300 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 TMEM250H0YL14 139 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 H3BQ15 152 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 NDUFS8O00217 210 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 PPP1R2P9O14990 202 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 FOXH1O75593 365 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 MOSP00540 346 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 REG1AP05451 166 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 ARL14EPLP0DKL9 152 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 PSMB3P49720 205 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 UBE2E1P51965 193 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 HILS1P60008 231 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 EBI3Q14213 229 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 MMDQ15546 238 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 SLC35E3Q7Z769 313 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 OR1P1Q8NH06 330 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 C17orf50Q8WW18 174 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 SRSF12Q8WXF0 261 aaKnown RBP4.74□□□□□ -1.65
SPEN-202ENST00000438066 SLC35E1Q96K37 410 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 SCRT2Q9NQ03 307 aa4.74□□□□□ -1.65
SPEN-202ENST00000438066 MRPL36Q9P0J6 103 aaKnown RBP4.74□□□□□ -1.65
SPEN-202ENST00000438066 TBL2Q9Y4P3 447 aaKnown RBP4.74□□□□□ -1.65
SPEN-202ENST00000438066 F11RQ9Y624 299 aaKnown RBP4.74□□□□□ -1.65
SPEN-202ENST00000438066 APCP25054 2843 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms