RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 TTC9CQ8N5M4 171 aa12.51□□□□□ -0.41
NEDD4-202ENST00000435532 SS18Q15532 418 aa12.51□□□□□ -0.41
NEDD4-202ENST00000435532 ST6GALNAC6Q969X2 333 aa12.51□□□□□ -0.41
NEDD4-202ENST00000435532 TRAV1-1A0A0B4J248 108 aa12.51□□□□□ -0.41
NEDD4-202ENST00000435532 LGALS1P09382 135 aaKnown RBP12.5□□□□□ -0.41
NEDD4-202ENST00000435532 NOTCH4Q99466 2003 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 EVI2AP22794 236 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 LAGE3Q14657 143 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 COL6A6A6NMZ7 2263 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 MORN3Q6PF18 240 aaPredicted RBP12.5□□□□□ -0.41
NEDD4-202ENST00000435532 LINC00469Q8N7U9 141 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 AGMATQ9BSE5 352 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 JKAMPQ9P055 326 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 CHTOPQ9Y3Y2 248 aaKnown RBP12.5□□□□□ -0.41
NEDD4-202ENST00000435532 IGHV7-4-1A0A0J9YVY3 117 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 IGKV1-6A0A0C4DH72 117 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 Q8TAT8 98 aa12.5□□□□□ -0.41
NEDD4-202ENST00000435532 COL5A1-AS1Q5SY13 56 aa12.49□□□□□ -0.41
NEDD4-202ENST00000435532 IGFL4Q6B9Z1 124 aa12.49□□□□□ -0.41
NEDD4-202ENST00000435532 VOPP1Q96AW1 172 aa12.49□□□□□ -0.41
NEDD4-202ENST00000435532 GNB1LQ9BYB4 327 aa12.49□□□□□ -0.41
NEDD4-202ENST00000435532 LYZL1Q6UWQ5 148 aa12.49□□□□□ -0.41
NEDD4-202ENST00000435532 HAPLN4Q86UW8 402 aa12.49□□□□□ -0.41
NEDD4-202ENST00000435532 LY96Q9Y6Y9 160 aa12.49□□□□□ -0.41
NEDD4-202ENST00000435532 RTTNQ86VV8 2226 aa12.48□□□□□ -0.41
NEDD4-202ENST00000435532 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
NEDD4-202ENST00000435532 TEX43Q6ZNM6 134 aa12.48□□□□□ -0.41
NEDD4-202ENST00000435532 COL4A4P53420 1690 aaPredicted RBP12.48□□□□□ -0.41
NEDD4-202ENST00000435532 RASL10AQ92737 203 aa12.48□□□□□ -0.41
NEDD4-202ENST00000435532 GPR179Q6PRD1 2367 aa12.48□□□□□ -0.41
NEDD4-202ENST00000435532 DPM2O94777 84 aa12.48□□□□□ -0.41
NEDD4-202ENST00000435532 SCGB1A1P11684 91 aa12.48□□□□□ -0.41
NEDD4-202ENST00000435532 SSBP4Q9BWG4 385 aaPredicted RBP12.48□□□□□ -0.41
NEDD4-202ENST00000435532 CHCHD1Q96BP2 118 aaKnown RBP12.47□□□□□ -0.41
NEDD4-202ENST00000435532 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
NEDD4-202ENST00000435532 Q8NA96 180 aa12.47□□□□□ -0.41
NEDD4-202ENST00000435532 ZNF524Q96C55 264 aa12.47□□□□□ -0.41
NEDD4-202ENST00000435532 TEX48A0A1B0GUV7 120 aa12.47□□□□□ -0.41
NEDD4-202ENST00000435532 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.47□□□□□ -0.41
NEDD4-202ENST00000435532 SMIM13P0DJ93 91 aa12.47□□□□□ -0.41
NEDD4-202ENST00000435532 RASL11AQ6T310 242 aa12.47□□□□□ -0.41
NEDD4-202ENST00000435532 SPINK13Q1W4C9 94 aa12.47□□□□□ -0.41
NEDD4-202ENST00000435532 CENPVL3A0A0U1RRI6 287 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 GZMBP10144 247 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 TRPT1Q86TN4 253 aaKnown RBP12.46□□□□□ -0.41
NEDD4-202ENST00000435532 CACNA1HO95180 2353 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 KIF26AQ9ULI4 1882 aaPredicted RBP12.46□□□□□ -0.41
NEDD4-202ENST00000435532 LINC00614P0C842 121 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 IGHV4-38-2P0DP08 117 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 AZU1P20160 251 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 LINC00158P58513 81 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 SLAQ13239 276 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 GFI1BQ5VTD9 330 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 S100A7L2Q5SY68 101 aa12.46□□□□□ -0.41
NEDD4-202ENST00000435532 IGHV1OR15-1A0A075B7D0 117 aa12.46□□□□□ -0.42
NEDD4-202ENST00000435532 IGLV3-1P01715 115 aa12.46□□□□□ -0.42
NEDD4-202ENST00000435532 LHBP01229 141 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 RSPO1Q2MKA7 263 aaPredicted RBP12.45□□□□□ -0.42
NEDD4-202ENST00000435532 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 MRAPQ8TCY5 172 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 NRGNQ92686 78 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 A8MWV9 139 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 CDKN1BP46527 198 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 A0A0G2JRQ6 117 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 MLANAQ16655 118 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 Q86TA4 180 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 HEATR1Q9H583 2144 aaKnown RBP12.45□□□□□ -0.42
NEDD4-202ENST00000435532 GAGE10A6NGK3 116 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 SMPXQ9UHP9 88 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 PLXND1Q9Y4D7 1925 aa12.45□□□□□ -0.42
NEDD4-202ENST00000435532 A0A1B0GW64 132 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 ATP6V0BQ99437 205 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 HOXD3P31249 432 aaPredicted RBP12.44□□□□□ -0.42
NEDD4-202ENST00000435532 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 ATOH7Q8N100 152 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 TTC28Q96AY4 2481 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 MMP23AO75900 390 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 C14orf178Q8N769 122 aaPredicted RBP12.44□□□□□ -0.42
NEDD4-202ENST00000435532 C2orf16Q68DN1 1984 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 LOXL1Q08397 574 aaPredicted RBP12.44□□□□□ -0.42
NEDD4-202ENST00000435532 MS4A6AQ9H2W1 248 aa12.44□□□□□ -0.42
NEDD4-202ENST00000435532 MRPL16Q9NX20 251 aaKnown RBP12.44□□□□□ -0.42
NEDD4-202ENST00000435532 LSM4Q9Y4Z0 139 aaKnown RBP12.44□□□□□ -0.42
NEDD4-202ENST00000435532 H3BRN7 92 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 PLNP26678 52 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 ZNF843Q8N446 348 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 PGPEP1Q9NXJ5 209 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 CEP250Q9BV73 2442 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 RPP25LQ8N5L8 163 aaKnown RBP12.43□□□□□ -0.42
NEDD4-202ENST00000435532 PRB4P10163 310 aaPredicted RBP12.43□□□□□ -0.42
NEDD4-202ENST00000435532 Q6ZRM9 215 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 FER1L5A0AVI2 2057 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 TRBV25-1A0A075B6N4 114 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 FOXI2Q6ZQN5 318 aa12.43□□□□□ -0.42
NEDD4-202ENST00000435532 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 SPXQ9BT56 116 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 CSTL1Q9H114 145 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 ADMP35318 185 aa12.42□□□□□ -0.42
NEDD4-202ENST00000435532 MYLKQ15746 1914 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms