RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 LYNX1P0DP58 116 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 HINT1P49773 126 aaPredicted RBP8.92□□□□□ -0.98
USP4-205ENST00000431357 TCF15Q12870 199 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 PDE6HQ13956 83 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 C5orf64Q2M2E5 130 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 SPATA12Q7Z6I5 190 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 OR11H6Q8NGC7 330 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 ZC2HC1AQ96GY0 325 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 ONECUT1Q9UBC0 465 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 MRPS12O15235 138 aaKnown RBP8.92□□□□□ -0.98
USP4-205ENST00000431357 NDUFA3O95167 84 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 SMIM17P0DL12 118 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 ZNF672Q499Z4 452 aaPredicted RBP8.92□□□□□ -0.98
USP4-205ENST00000431357 ZNF414Q96IQ9 312 aa8.92□□□□□ -0.98
USP4-205ENST00000431357 OVOL3O00110 214 aa8.91□□□□□ -0.98
USP4-205ENST00000431357 IL4P05112 153 aa8.91□□□□□ -0.98
USP4-205ENST00000431357 CD24P25063 80 aa8.91□□□□□ -0.98
USP4-205ENST00000431357 PRB3Q04118 309 aaPredicted RBP8.91□□□□□ -0.98
USP4-205ENST00000431357 MS4A6AQ9H2W1 248 aa8.91□□□□□ -0.98
USP4-205ENST00000431357 CNOT1A5YKK6 2376 aaKnown RBP8.91□□□□□ -0.98
USP4-205ENST00000431357 ZNF318Q5VUA4 2279 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 FBLL1A6NHQ2 334 aaKnown RBP8.9□□□□□ -0.98
USP4-205ENST00000431357 ZNF785A8K8V0 405 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 NPIPB5A8MRT5 1133 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 J3KRW8 73 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 CT45A10P0DMU9 189 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 MFAP4P55083 255 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 FBXL19-AS1Q494R0 122 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 CFHR4Q92496 578 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 AAMDCQ9H7C9 122 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 PLXNB1O43157 2135 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 ZGRF1Q86YA3 2104 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 MALRD1Q5VYJ5 2156 aa8.9□□□□□ -0.98
USP4-205ENST00000431357 H0Y8G0 127 aa8.9□□□□□ -0.99
USP4-205ENST00000431357 M0R1W7 72 aa8.9□□□□□ -0.99
USP4-205ENST00000431357 GNG7O60262 68 aa8.9□□□□□ -0.99
USP4-205ENST00000431357 ARMS2P0C7Q2 107 aa8.9□□□□□ -0.99
USP4-205ENST00000431357 FCGR2BP31994 310 aaPredicted RBP8.9□□□□□ -0.99
USP4-205ENST00000431357 PSG9Q00887 426 aa8.9□□□□□ -0.99
USP4-205ENST00000431357 PRR30Q53SZ7 412 aaPredicted RBP8.9□□□□□ -0.99
USP4-205ENST00000431357 C17orf77Q96MU5 243 aa8.9□□□□□ -0.99
USP4-205ENST00000431357 CSN1S1P47710 185 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 RIPPLY3P57055 190 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 SLC25A34Q6PIV7 304 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 ZNF493Q6ZR52 646 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 LINC00173Q6ZV60 143 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 LINC01560Q8TB33 94 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 NEU4Q8WWR8 484 aaPredicted RBP8.89□□□□□ -0.99
USP4-205ENST00000431357 TIMD4Q96H15 378 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 ZNF479Q96JC4 524 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 IGLV11-55A0A075B6I3 123 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 SCGB2A1O75556 95 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 PRR31Q5SQ13 230 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 FA2HQ7L5A8 372 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 AP5S1Q9NUS5 200 aa8.89□□□□□ -0.99
USP4-205ENST00000431357 ZFHX4Q86UP3 3567 aa8.88□□□□□ -0.99
USP4-205ENST00000431357 RP1L1Q8IWN7 2480 aaPredicted RBP8.88□□□□□ -0.99
USP4-205ENST00000431357 NBL1P41271 181 aa8.88□□□□□ -0.99
USP4-205ENST00000431357 CRIP1P50238 77 aa8.88□□□□□ -0.99
USP4-205ENST00000431357 ZNF562Q6V9R5 426 aa8.88□□□□□ -0.99
USP4-205ENST00000431357 COX8CQ7Z4L0 72 aa8.88□□□□□ -0.99
USP4-205ENST00000431357 IGFBPL1Q8WX77 278 aa8.88□□□□□ -0.99
USP4-205ENST00000431357 THYN1Q9P016 225 aa8.88□□□□□ -0.99
USP4-205ENST00000431357 ODF3BA8MYP8 253 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 K7ENP7 123 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 PRTN3P24158 256 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 LINC01545Q5VT33 79 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 TTC9CQ8N5M4 171 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 OR10AG1Q8NH19 301 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 PRSS3P2Q8NHM4 247 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 HILPDAQ9Y5L2 63 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 hDV102S1A0JD36 115 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 TMEM189A5PLL7 270 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 OOSP1A8MZH6 123 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 TAX1BP3O14907 124 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 RPL7P18124 248 aaKnown RBP8.87□□□□□ -0.99
USP4-205ENST00000431357 ZNF138P52744 262 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 TCTEX1D4Q5JR98 221 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 CCDC144NLQ6NUI1 221 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 C12orf54Q6X4T0 127 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 GTF2H5Q6ZYL4 71 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 DEFB125Q8N687 156 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 FANCD2OSQ96PS1 177 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 SIGMAR1Q99720 223 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 PMCHL2Q9BQD1 86 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 SCRT2Q9NQ03 307 aa8.87□□□□□ -0.99
USP4-205ENST00000431357 PEF1Q9UBV8 284 aaKnown RBP8.87□□□□□ -0.99
USP4-205ENST00000431357 ROS1P08922 2347 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 CSN3P07498 182 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 HES1Q14469 280 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 Q71RC1 249 aaPredicted RBP8.86□□□□□ -0.99
USP4-205ENST00000431357 ARPC1AQ92747 370 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 ZNF747Q9BV97 191 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 C21orf62Q9NYP8 219 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 U3KQK5 164 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 FAM90A27PA6NNH2 459 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 M0R3E3 92 aa8.86□□□□□ -0.99
USP4-205ENST00000431357 PKDREJQ9NTG1 2253 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms