RNA–Protein interactions for RNA: ENST00000429040.5

SLC39A1-207, Transcript of solute carrier family 39 member 1, humanhuman

TSL 2

Gene SLC39A1, Length 1,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-207ENST00000429040 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
SLC39A1-207ENST00000429040 FOLR2P14207 255 aa12.85□□□□□ -0.35
SLC39A1-207ENST00000429040 SAMD13Q5VXD3 122 aa12.85□□□□□ -0.35
SLC39A1-207ENST00000429040 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
SLC39A1-207ENST00000429040 PCNPQ8WW12 178 aaKnown RBP12.85□□□□□ -0.35
SLC39A1-207ENST00000429040 IGHV3OR16-13A0A075B7E8 117 aa12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 IGHV3-74A0A0B4J1X5 117 aa12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 EIF3GO75821 320 aaKnown RBP eCLIP12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 APOHP02749 345 aaPredicted RBP12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 OR10J4P0C629 311 aa12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 GLMPQ8WWB7 406 aa12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 SIGLEC8Q9NYZ4 499 aa12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 ARL2-SNX15V9GYD0 113 aa12.84□□□□□ -0.35
SLC39A1-207ENST00000429040 PYYP10082 97 aa12.83□□□□□ -0.36
SLC39A1-207ENST00000429040 RPL11P62913 178 aaKnown RBP12.83□□□□□ -0.36
SLC39A1-207ENST00000429040 PMS2P11Q13670 270 aa12.83□□□□□ -0.36
SLC39A1-207ENST00000429040 PDE6HQ13956 83 aa12.83□□□□□ -0.36
SLC39A1-207ENST00000429040 FXYD5Q96DB9 178 aa12.83□□□□□ -0.36
SLC39A1-207ENST00000429040 GNG13Q9P2W3 67 aa12.83□□□□□ -0.36
SLC39A1-207ENST00000429040 A0A087X0K7 114 aa12.82□□□□□ -0.36
SLC39A1-207ENST00000429040 SAP30O75446 220 aa12.82□□□□□ -0.36
SLC39A1-207ENST00000429040 CSN3P07498 182 aa12.82□□□□□ -0.36
SLC39A1-207ENST00000429040 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
SLC39A1-207ENST00000429040 IGLC2P0DOY2 106 aa12.82□□□□□ -0.36
SLC39A1-207ENST00000429040 TCF24Q7RTU0 167 aa12.82□□□□□ -0.36
SLC39A1-207ENST00000429040 NKX6-2Q9C056 277 aaPredicted RBP12.82□□□□□ -0.36
SLC39A1-207ENST00000429040 U3KQK5 164 aa12.82□□□□□ -0.36
SLC39A1-207ENST00000429040 ZNF253O75346 499 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 NDUFA5Q16718 116 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 SUN5Q8TC36 379 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 BLNKQ8WV28 456 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 ZNF503Q96F45 646 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 ASCL2Q99929 193 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 TXNDC17Q9BRA2 123 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 MED9Q9NWA0 146 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 SMAD5-AS1Q9Y6J3 95 aa12.81□□□□□ -0.36
SLC39A1-207ENST00000429040 TRBV19A0A075B6N1 114 aa12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 MRPS12O15235 138 aaKnown RBP12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 BCL2P10415 239 aa12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 PSG9Q00887 426 aa12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 RBPMS2Q6ZRY4 209 aaKnown RBP12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 LYPD1Q8N2G4 141 aa12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 TMPRSS5Q9H3S3 457 aa12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 CLEC5AQ9NY25 188 aa12.8□□□□□ -0.36
SLC39A1-207ENST00000429040 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 A0A1W2PRE2 83 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 LINC00862A6NCI5 91 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 CCL20P78556 96 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 CST9LP1Q5W188 147 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 OR2K2Q8NGT1 345 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 FAM210AQ96ND0 272 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 EIF5A2Q9GZV4 153 aaKnown RBP12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 MLXQ9UH92 298 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
SLC39A1-207ENST00000429040 RAB19A4D1S5 217 aa12.78□□□□□ -0.36
SLC39A1-207ENST00000429040 H3BQ15 152 aa12.78□□□□□ -0.36
SLC39A1-207ENST00000429040 UBE2G2P60604 165 aa12.78□□□□□ -0.36
SLC39A1-207ENST00000429040 HAGHQ16775 308 aa12.78□□□□□ -0.36
SLC39A1-207ENST00000429040 TCEAL7Q9BRU2 100 aa12.78□□□□□ -0.36
SLC39A1-207ENST00000429040 ZNF586Q9NXT0 402 aa12.78□□□□□ -0.36
SLC39A1-207ENST00000429040 TENM3Q9P273 2699 aa12.77□□□□□ -0.36
SLC39A1-207ENST00000429040 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 DNASE2O00115 360 aaPredicted RBP12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 PAGE4O60829 102 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 EDN2P20800 178 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 ID1P41134 155 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 PEA15Q15121 130 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 DEFB114Q30KQ6 69 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 TOR2AQ5JU69 321 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 COMMD7Q86VX2 200 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
SLC39A1-207ENST00000429040 TRAV2A0A0B4J234 112 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 LOC102723971A0A1B0GUV8 181 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 FAM74A7A6NL05 159 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 C11orf94C9JXX5 98 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 MEF2BQ02080 365 aaPredicted RBP12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 ZNF506Q5JVG8 444 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 FAM90A2PQ658T7 463 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 ADAMTSL5Q6ZMM2 481 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 C16orf92Q96LL3 132 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 Q9H3A6 140 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 PRELID1Q9Y255 219 aa12.76□□□□□ -0.37
SLC39A1-207ENST00000429040 F6UZH7 168 aa12.75□□□□□ -0.37
SLC39A1-207ENST00000429040 H3BTX0 84 aa12.75□□□□□ -0.37
SLC39A1-207ENST00000429040 ISLRO14498 428 aa12.75□□□□□ -0.37
SLC39A1-207ENST00000429040 TSPAN4O14817 238 aa12.75□□□□□ -0.37
SLC39A1-207ENST00000429040 PDE6DO43924 150 aa12.75□□□□□ -0.37
SLC39A1-207ENST00000429040 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
SLC39A1-207ENST00000429040 SNRPCP09234 159 aaKnown RBP12.75□□□□□ -0.37
SLC39A1-207ENST00000429040 CSN1S1P47710 185 aa12.75□□□□□ -0.37
SLC39A1-207ENST00000429040 LCN12Q6JVE5 192 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms